RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 HLA-DQA1P01909 254 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 MT-ND6P03923 174 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 CAMPP49913 170 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 SRSF1Q07955 248 aaKnown RBP eCLIP7.85□□□□□ -1.15
TMEM260-211ENST00000556648 Q0VG73 95 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 PSG3Q16557 428 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 WIPF2Q8TF74 440 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-211ENST00000556648 PGLYRP4Q96LB8 373 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 TXN2Q99757 166 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 ZNF331Q9NQX6 463 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-211ENST00000556648 RABAC1Q9UI14 185 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 PSG8Q9UQ74 426 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 TRBV6-1A0A0K0K1D8 114 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 CLPSL1A2RUU4 121 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 NDUFS8O00217 210 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 ZNF207O43670 478 aaKnown RBP7.85□□□□□ -1.15
TMEM260-211ENST00000556648 MSMBP08118 114 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 C19orf54Q5BKX5 351 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 DNLZQ5SXM8 178 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 Q6ZWC4 215 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 SPOCK3Q9BQ16 436 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 RNF114Q9Y508 228 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 ACACBO00763 2458 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 DOPEY1Q5JWR5 2465 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 IGHV3OR16-13A0A075B7E8 117 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 IGHV3-49A0A0A0MS15 119 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 IGHV3-74A0A0B4J1X5 117 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 NPIPB6E9PJ23 425 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 H3BUX3 64 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 APOHP02749 345 aaPredicted RBP7.84□□□□□ -1.15
TMEM260-211ENST00000556648 PAX1P15863 534 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 CRIP1P50238 77 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 C16orf54Q6UWD8 224 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 LYPD1Q8N2G4 141 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 DAZAP1Q96EP5 407 aaKnown RBP7.84□□□□□ -1.15
TMEM260-211ENST00000556648 USP24Q9UPU5 2620 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 CACNA1BQ00975 2339 aa7.84□□□□□ -1.15
TMEM260-211ENST00000556648 USP9XQ93008 2570 aaPredicted RBP7.84□□□□□ -1.15
TMEM260-211ENST00000556648 SPTAN1Q13813 2472 aaKnown RBP7.84□□□□□ -1.15
TMEM260-211ENST00000556648 TRAV41A0A0B4J266 112 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 ZNF705FA8MVS1 300 aaPredicted RBP7.83□□□□□ -1.16
TMEM260-211ENST00000556648 IGHG4P01861 327 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 ESDP10768 282 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 COL8A1P27658 744 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 CTAG1AP78358 180 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 COX19Q49B96 90 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 Q6ZS46 218 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 MEGF9Q9H1U4 602 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 RNF24Q9Y225 148 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 CELSR1Q9NYQ6 3014 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 A8MWL6 223 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 RPL7P18124 248 aaKnown RBP7.83□□□□□ -1.16
TMEM260-211ENST00000556648 PDE6HQ13956 83 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 CT83Q5H943 113 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 ZNF843Q8N446 348 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 MAPK1IP1LQ8NDC0 245 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 Q8TAT8 98 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 EEF1AKMT3Q96AZ1 226 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 HIF1ANQ9NWT6 349 aa7.83□□□□□ -1.16
TMEM260-211ENST00000556648 UTP20O75691 2785 aaKnown RBP7.83□□□□□ -1.16
TMEM260-211ENST00000556648 FLNCQ14315 2725 aa7.82□□□□□ -1.16
TMEM260-211ENST00000556648 TRAV20A0A0B4J274 112 aa7.82□□□□□ -1.16
TMEM260-211ENST00000556648 A6NDX4 124 aa7.82□□□□□ -1.16
TMEM260-211ENST00000556648 CHEK1O14757 476 aa7.82□□□□□ -1.16
TMEM260-211ENST00000556648 SCGB2A1O75556 95 aa7.82□□□□□ -1.16
TMEM260-211ENST00000556648 TPPP2P59282 170 aa7.82□□□□□ -1.16
TMEM260-211ENST00000556648 RASL11AQ6T310 242 aa7.82□□□□□ -1.16
TMEM260-211ENST00000556648 AAMDCQ9H7C9 122 aa7.82□□□□□ -1.16
TMEM260-211ENST00000556648 A0A1W2PS18 150 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 ZNF253O75346 499 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 TRBV12-3P01733 135 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 PMCHP20382 165 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 HBBP68871 147 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 ATP5G2Q06055 141 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 S100A7AQ86SG5 101 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 ZNF664Q8N3J9 261 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 RNF182Q8N6D2 247 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 KCNS1Q96KK3 526 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 VGLL1Q99990 258 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 PRAC2D3DTV9 90 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 K7EQM0 130 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 SCGB1D1O95968 90 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 CRIP2P52943 208 aaPredicted RBP7.81□□□□□ -1.16
TMEM260-211ENST00000556648 PKIAP61925 76 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 BLCAPP62952 87 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 PSG9Q00887 426 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 OR10J3Q5JRS4 329 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 RBPMS2Q6ZRY4 209 aaKnown RBP7.81□□□□□ -1.16
TMEM260-211ENST00000556648 LCNL1Q6ZST4 164 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 ATP5L2Q7Z4Y8 100 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 OR4B1Q8NGF8 309 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 ALKBH7Q9BT30 221 aaPredicted RBP7.81□□□□□ -1.16
TMEM260-211ENST00000556648 SAMD10Q9BYL1 202 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 NAGKQ9UJ70 344 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 ZFP30Q9Y2G7 519 aa7.81□□□□□ -1.16
TMEM260-211ENST00000556648 A0A096LNT2 108 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms