RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 A0A1B0GX51 115 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM262E9PQX1 116 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 K7ENP7 123 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 NDUFC2O95298 119 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 IAPPP10997 89 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 CRYBB3P26998 211 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 GALR1P47211 349 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 C18orf15Q96N68 181 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 SMDT1Q9H4I9 107 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 JPT2Q9H910 190 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 FBXL7Q9UJT9 491 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 COL12A1Q99715 3063 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 F8W1H4 67 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 CRISP2P16562 243 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 HSPE1P61604 102 aaKnown RBP4.11□□□□□ -1.75
TMEM260-210ENST00000556422 HERVK_113P63121 156 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 CCL20P78556 96 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF816Q0VGE8 651 aaPredicted RBP4.11□□□□□ -1.75
TMEM260-210ENST00000556422 GAGE2AQ6NT46 116 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 DDB2Q92466 427 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 EEF1AKMT3Q96AZ1 226 aa4.11□□□□□ -1.75
TMEM260-210ENST00000556422 ZFYVE26Q68DK2 2539 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 TRAV9-2A0A087WT02 112 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 MGST3O14880 152 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 SPRY2O43597 315 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 LEPP41159 167 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 C17orf58Q2M2W7 97 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 SERTAD4-AS1Q5TG53 156 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 APRG1Q8IVJ8 170 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF525Q8N782 197 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 NUP37Q8NFH4 326 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 OR2T10Q8NGZ9 312 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 Q96MF0 132 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 TM2D2Q9BX73 214 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 IFI27L2Q9H2X8 130 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 ABCA4P78363 2273 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 PIGBOS1A0A0B4J2F0 54 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 PMS2P5A8MQ11 134 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 H3BRM9 83 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 IGHV3-7P01780 117 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 DUTP33316 252 aaKnown RBP4.1□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM14EPQ6UXP3 125 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 BPIFA4PQ86YQ2 179 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 RBMXL1Q96E39 390 aaKnown RBP4.1□□□□□ -1.75
TMEM260-210ENST00000556422 FAM90A26D6RGX4 464 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM250H0YL14 139 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 PRRG2O14669 202 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 KBTBD11O94819 623 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 MOB3BQ86TA1 216 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 ZCCHC24Q8N2G6 241 aaKnown RBP4.1□□□□□ -1.75
TMEM260-210ENST00000556422 OR4X2Q8NGF9 303 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 ARPC1AQ92747 370 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 GAFA1Q96PS6 74 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 VSIRQ9H7M9 311 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 PSENENQ9NZ42 101 aa4.1□□□□□ -1.75
TMEM260-210ENST00000556422 C17orf112F2Z3M2 114 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 SPINT2O43291 252 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 YPEL1O60688 119 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 CLDN14O95500 239 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 BSPH1Q075Z2 132 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 WFDC2Q14508 124 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF726P1Q15940 193 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 Q56UQ5 140 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 RPL39P5Q59GN2 51 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 IBA57Q5T440 356 aaKnown RBP4.09□□□□□ -1.75
TMEM260-210ENST00000556422 SAMD5Q5TGI4 173 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 WFDC3Q8IUB2 231 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 OR10J6PQ8NGY7 276 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 YPEL2Q96QA6 119 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 FLNBO75369 2602 aaKnown RBP4.09□□□□□ -1.75
TMEM260-210ENST00000556422 TRBV9A0A0B4J1U6 114 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 A0A1W2PPM0 123 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 C16orf97H3BN30 126 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 CD55P08174 381 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 GPR183P32249 361 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 CTRLP40313 264 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 EDDM3BP56851 147 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 TAS2R45P59539 299 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 TNFAIP6P98066 277 aaPredicted RBP4.09□□□□□ -1.75
TMEM260-210ENST00000556422 SPANXN5Q5MJ07 72 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 GFRALQ6UXV0 394 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 FAM216BQ8N7L0 139 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 GATD1Q8NB37 220 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 LEAP2Q969E1 77 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 PRELID3AQ96N28 172 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 CALYQ9NYX4 217 aa4.09□□□□□ -1.75
TMEM260-210ENST00000556422 H0YJW9 148 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 OR9G9P0C7N8 305 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 NHLRC4P0CG21 123 aaPredicted RBP4.09□□□□□ -1.76
TMEM260-210ENST00000556422 GRNP28799 593 aaKnown RBP4.09□□□□□ -1.76
TMEM260-210ENST00000556422 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.76
TMEM260-210ENST00000556422 CCL8P80075 99 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 GAGE13Q4V321 117 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 TEX36Q5VZQ5 186 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 CYB561D1Q8N8Q1 229 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 RPRMQ9NS64 109 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 RNF7Q9UBF6 113 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 HIVEP3Q5T1R4 2406 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms