RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 LINC00311Q8N616 119 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 RAB37Q96AX2 223 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 RPL7P18124 248 aaKnown RBP11.85□□□□□ -0.51
NEK9-209ENST00000556170 WFDC3Q8IUB2 231 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 TSKUQ8WUA8 353 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 C11orf52Q96A22 123 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 ZNF503Q96F45 646 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 C17orf77Q96MU5 243 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 ZNF324O75467 553 aaPredicted RBP11.85□□□□□ -0.51
NEK9-209ENST00000556170 NHLH1Q02575 133 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 FAM162BQ5T6X4 162 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
NEK9-209ENST00000556170 TRAV9-1A0A075B6T8 112 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 PF4V1P10720 104 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 PPIFP30405 207 aaKnown RBP11.84□□□□□ -0.51
NEK9-209ENST00000556170 ATP5J2P56134 94 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 KHDC1LQ5JSQ8 128 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 BRD3OSQ6XYD6 125 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 FXYD5Q96DB9 178 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 FMC1Q96HJ9 113 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 MCRIP2Q9BUT9 160 aaKnown RBP11.84□□□□□ -0.51
NEK9-209ENST00000556170 GNLYP22749 145 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 FCER1GP30273 86 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 SLAQ13239 276 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 KCNS1Q96KK3 526 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 PSG8Q9UQ74 426 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 CFAP47Q6ZTR5 3102 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 TRAV30A0A087WSZ9 112 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 AMMECR1LQ6DCA0 310 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 Q8TAT8 98 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 OTORQ9NRC9 128 aa11.84□□□□□ -0.51
NEK9-209ENST00000556170 IGKV2-40A0A087WW87 121 aaPredicted RBP11.83□□□□□ -0.52
NEK9-209ENST00000556170 IGKV2D-40P01614 121 aaPredicted RBP11.83□□□□□ -0.52
NEK9-209ENST00000556170 IGHV3-11P01762 117 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 ORAOV1Q8WV07 137 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 C1orf159Q96HA4 380 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 CCL25O15444 150 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 SMAGPQ0VAQ4 97 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 TMEM249Q2WGJ8 235 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 RBPMS2Q6ZRY4 209 aaKnown RBP11.83□□□□□ -0.52
NEK9-209ENST00000556170 STPG4Q8N801 248 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 FAM167A-AS1Q96KT0 104 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 LY96Q9Y6Y9 160 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 A0A1B0GUT8 65 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 NPIPB5A8MRT5 1133 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 CDKN1BP46527 198 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 RHOGP84095 191 aa11.83□□□□□ -0.52
NEK9-209ENST00000556170 IGLV2-23P01705 113 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 OCIAD2Q56VL3 154 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 C12orf54Q6X4T0 127 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 RCHY1Q96PM5 261 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 PRTN3P24158 256 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 YPEL3P61236 119 aaPredicted RBP11.82□□□□□ -0.52
NEK9-209ENST00000556170 FAM71F2Q6NXP2 309 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 TMEM136Q6ZRR5 245 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 Q6ZWC4 215 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 MAP1LC3CQ9BXW4 147 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 CST9LQ9H4G1 147 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 C2CD3Q4AC94 2353 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 C15orf32Q32M92 178 aa11.82□□□□□ -0.52
NEK9-209ENST00000556170 SNAI2O43623 268 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 GPX1P07203 203 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 IGLC1P0CG04 106 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 BMI1P35226 326 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 ARL3P36405 182 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 SCGB2A2Q13296 93 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 TMEM191AQ9H0A3 160 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 TMEM238C9JI98 176 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 CKS2P33552 79 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 COX11Q9Y6N1 276 aa11.81□□□□□ -0.52
NEK9-209ENST00000556170 DLX6P56179 175 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 SLC25A34Q6PIV7 304 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 TMEM116Q8NCL8 245 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 ATMQ13315 3056 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 NDUFB8O95169 186 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 FXYD7P58549 80 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 TDRG1Q3Y452 100 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 C16orf92Q96LL3 132 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 C20orf144Q9BQM9 153 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 ABCA2Q9BZC7 2435 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 A1L4Q6 167 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 IGLV1-47P01700 117 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 C3orf79P0CE67 100 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 PVRIGQ6DKI7 326 aa11.8□□□□□ -0.52
NEK9-209ENST00000556170 TET2Q6N021 2002 aaPredicted RBP11.8□□□□□ -0.52
NEK9-209ENST00000556170 A0A1W2PS18 150 aa11.79□□□□□ -0.52
NEK9-209ENST00000556170 G3V318 75 aa11.79□□□□□ -0.52
NEK9-209ENST00000556170 SAA4P35542 130 aa11.79□□□□□ -0.52
NEK9-209ENST00000556170 CDSNQ15517 529 aa11.79□□□□□ -0.52
NEK9-209ENST00000556170 TRAV40A0A0B4J280 105 aa11.79□□□□□ -0.52
NEK9-209ENST00000556170 APOHP02749 345 aaPredicted RBP11.79□□□□□ -0.52
NEK9-209ENST00000556170 TRGV3P03979 118 aa11.79□□□□□ -0.52
NEK9-209ENST00000556170 METTL26Q96S19 204 aa11.79□□□□□ -0.52
NEK9-209ENST00000556170 AP5S1Q9NUS5 200 aa11.79□□□□□ -0.52
NEK9-209ENST00000556170 ADORA2A-AS1P86434 159 aa11.78□□□□□ -0.52
NEK9-209ENST00000556170 PEF1Q9UBV8 284 aaKnown RBP11.78□□□□□ -0.52
NEK9-209ENST00000556170 PKD1L2Q7Z442 2459 aa11.78□□□□□ -0.52
NEK9-209ENST00000556170 PRSS1P07477 247 aa11.78□□□□□ -0.52
NEK9-209ENST00000556170 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
NEK9-209ENST00000556170 NDPQ00604 133 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms