RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	AAMDC	Q9H7C9	122 aa		4.29	□□□□□ -1.72
ATL1-208	ENST00000556067	UFC1	Q9Y3C8	167 aa		4.29	□□□□□ -1.72
ATL1-208	ENST00000556067	ITPR3	Q14573	2671 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	HELT	A6NFD8	242 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	FAM74A7	A6NL05	159 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	S100A9	P06702	114 aa	Known RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	LGALS1	P09382	135 aa	Known RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	PYY	P10082	97 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	CSN1S1	P47710	185 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	CNN1	P51911	297 aa	Known RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	RAN	P62826	216 aa	Known RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	PNRC1	Q12796	327 aa	Predicted RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	KIAA0141	Q14154	515 aa	Predicted RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	USF2	Q15853	346 aa	Predicted RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	TMEM241	Q24JQ0	296 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	LEMD1	Q68G75	181 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	LYPD1	Q8N2G4	141 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	CYB561D1	Q8N8Q1	229 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	FXYD5	Q96DB9	178 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	TVP23C	Q96ET8	276 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	FAM167A-AS1	Q96KT0	104 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	SCRT1	Q9BWW7	348 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	C16orf95	Q9H693	158 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	PRELID1	Q9Y255	219 aa		4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	MAP1A	P78559	2803 aa	Predicted RBP	4.28	□□□□□ -1.72
ATL1-208	ENST00000556067	PDZD2	O15018	2839 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	NAV3	Q8IVL0	2385 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	NOTCH2	Q04721	2471 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067		A0A1B0GUS0	222 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	PGP	A6NDG6	321 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067		B4DEV8	164 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067		H3BQ15	152 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067		K7EMT4	169 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	CRLF1	O75462	422 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	NDUFB4	O95168	129 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	NDUFA7	O95182	113 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	SLC25A5	P05141	298 aa	Known RBP	4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	GP9	P14770	177 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	AKR1C3	P42330	323 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	CDX1	P47902	265 aa	Predicted RBP	4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	ATP5G3	P48201	142 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	CD81	P60033	236 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	UBE2G1	P62253	170 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	PDE6H	Q13956	83 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	C10orf91	Q5T1B1	145 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	SAMD13	Q5VXD3	122 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	GPHB5	Q86YW7	130 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	RNF152	Q8N8N0	203 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	HIST1H2BA	Q96A08	127 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	MLST8	Q9BVC4	326 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	ESM1	Q9NQ30	184 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	DAZ1	Q9NQZ3	744 aa	Known RBP	4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	OTOR	Q9NRC9	128 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	SERTAD4	Q9NUC0	356 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	CLEC5A	Q9NY25	188 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	NAT8	Q9UHE5	227 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	CSPG4	Q6UVK1	2322 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	PLXNB1	O43157	2135 aa		4.27	□□□□□ -1.73
ATL1-208	ENST00000556067	FLNA	P21333	2647 aa	Known RBP	4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	ITPR2	Q14571	2701 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	TRBV19	A0A075B6N1	114 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	IGHV3OR16-8	A0A075B7F1	116 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	CLPSL1	A2RUU4	121 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067		C9JQL5	133 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	LINC01619	G3V211	115 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	ZNF207	O43670	478 aa	Known RBP	4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	BUB3	O43684	328 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	MT-ND4L	P03901	98 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	CRYBB3	P26998	211 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	GNG4	P50150	75 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	RHEB	Q15382	184 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	ADIRF	Q15847	76 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	MORN5	Q5VZ52	161 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	C10orf99	Q6UWK7	81 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	SIGLEC15	Q6ZMC9	328 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	C5orf17	Q8NAS9	161 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	KLHL30-AS1	Q8NEE0	82 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	OR1N2	Q8NGR9	330 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	C4orf3	Q8WVX3	66 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	SLC50A1	Q9BRV3	221 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	PARL	Q9H300	379 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067		Q9H3A6	140 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	RPS10P5	Q9NQ39	176 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	BIN3	Q9NQY0	253 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	PEMT	Q9UBM1	199 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	EPDR1	Q9UM22	224 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	RPH3AL	Q9UNE2	315 aa		4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.26	□□□□□ -1.73
ATL1-208	ENST00000556067	HIVEP2	P31629	2446 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	IGHV3OR16-13	A0A075B7E8	117 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	IGHV3-49	A0A0A0MS15	119 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	IGHV3-74	A0A0B4J1X5	117 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	IGHV3-66	A0A0C4DH42	116 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	IGHV7-4-1	A0A0J9YVY3	117 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	SERTM2	A0A1B0GWG4	89 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	FBLL1	A6NHQ2	334 aa	Known RBP	4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	GGTLC3	B5MD39	225 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067		H3BTX0	84 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms