RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 GGACTQ9BVM4 153 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 CDC42SE1Q9NRR8 79 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 TRAPPC2LQ9UL33 140 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 CHCHD2Q9Y6H1 151 aaPredicted RBP0.73□□□□□ -2.29
SCFD1-217ENST00000555953 U3KQ87 197 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 V9GYQ6 96 aa0.73□□□□□ -2.29
SCFD1-217ENST00000555953 ZCCHC11Q5TAX3 1644 aaKnown RBP0.73□□□□□ -2.29
SCFD1-217ENST00000555953 MYH3P11055 1940 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 FRMPD1Q5SYB0 1578 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 A0A1B0GV72 72 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 GNG14A0A1W2PPG7 69 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 TCRBV4S1A1TA0A5B7 111 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 GABARAPH6UMI1 98 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 CD2P06729 351 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 OGNP20774 298 aaKnown RBP0.72□□□□□ -2.29
SCFD1-217ENST00000555953 TCTAP57738 103 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 SPRNQ5BIV9 151 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 FAM74A1Q5RGS3 127 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 C1orf140Q5VVS0 124 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 TMEM14EPQ6UXP3 125 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 SMIM15Q7Z3B0 74 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 AKAP14Q86UN6 197 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 OR5D14Q8NGL3 314 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 POP5Q969H6 163 aaKnown RBP0.72□□□□□ -2.29
SCFD1-217ENST00000555953 PBOV1Q9GZY1 135 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 HEATR1Q9H583 2144 aaKnown RBP0.72□□□□□ -2.29
SCFD1-217ENST00000555953 LRTM1Q9HBL6 345 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 LY96Q9Y6Y9 160 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 SIP14410 1827 aa0.72□□□□□ -2.29
SCFD1-217ENST00000555953 TRBV6-4A0A1B0GX49 114 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 TRDV1A0A1B0GX56 115 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 TLCD2A6NGC4 264 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 C17orf112F2Z3M2 114 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 APOA2P02652 100 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 HLA-EP13747 358 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 S100A11P31949 105 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 DSCR4P56555 118 aaPredicted RBP0.71□□□□□ -2.3
SCFD1-217ENST00000555953 RTL8BQ17RB0 113 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 EIF5AL1Q6IS14 154 aaKnown RBP0.71□□□□□ -2.3
SCFD1-217ENST00000555953 ZNF833PQ6ZTB9 187 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 PRR15Q8IV56 129 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 TEX29Q8N6K0 151 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 OR2T35Q8NGX2 323 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 THEM6Q8WUY1 208 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 CCDC115Q96NT0 180 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 TP53RKQ96S44 253 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 TMEM70Q9BUB7 260 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 EFCAB11Q9BUY7 163 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 RTL8AQ9BWD3 113 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 POPDC3Q9HBV1 291 aa0.71□□□□□ -2.3
SCFD1-217ENST00000555953 ROCK1Q13464 1354 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 COL24A1Q17RW2 1714 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 MYO5AQ9Y4I1 1855 aaKnown RBP0.7□□□□□ -2.3
SCFD1-217ENST00000555953 PRORSD1PA6NEY8 169 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 E7EUB6 86 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 C5orf67F2Z3F1 127 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 CCL16O15467 120 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 IFNA14P01570 189 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 POLR2HP52434 150 aaKnown RBP0.7□□□□□ -2.3
SCFD1-217ENST00000555953 HBBP68871 147 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 EIF3IQ13347 325 aaKnown RBP0.7□□□□□ -2.3
SCFD1-217ENST00000555953 TMEM128Q5BJH2 165 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 Q5XG85 94 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 IFT20Q8IY31 132 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 NUP35Q8NFH5 326 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 OR4K15Q8NH41 348 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 PPTC7Q8NI37 304 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 BORCS5Q969J3 196 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 CHCHD1Q96BP2 118 aaKnown RBP0.7□□□□□ -2.3
SCFD1-217ENST00000555953 MUCL1Q96DR8 90 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 MALSU1Q96EH3 234 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 DDA1Q9BW61 102 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 CENPHQ9H3R5 247 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 TAS2R7Q9NYW3 318 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 ORMDL1Q9P0S3 153 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 NAT8BQ9UHF3 227 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 LAMA4Q16363 1823 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 PHRF1Q9P1Y6 1649 aaKnown RBP0.7□□□□□ -2.3
SCFD1-217ENST00000555953 CASP8AP2Q9UKL3 1982 aa0.7□□□□□ -2.3
SCFD1-217ENST00000555953 COL1A1P02452 1464 aaPredicted RBP0.69□□□□□ -2.3
SCFD1-217ENST00000555953 CECR2Q9BXF3 1484 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 CNTRLQ7Z7A1 2325 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.69□□□□□ -2.3
SCFD1-217ENST00000555953 A0A087WSZ3 146 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 TRAV10A0A0B4J240 114 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 TRAV5A0A0B4J249 113 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 A0A1B0GW64 132 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 C9orf170A2RU37 121 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 M0QZK8 103 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 RER1O15258 196 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 ERC2-IT1O76042 136 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 FABP2P12104 132 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 ZNF25P17030 456 aaPredicted RBP0.69□□□□□ -2.3
SCFD1-217ENST00000555953 TFAMQ00059 246 aaKnown RBP0.69□□□□□ -2.3
SCFD1-217ENST00000555953 KRTAP26-1Q6PEX3 210 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 PHF5AQ7RTV0 110 aaKnown RBP0.69□□□□□ -2.3
SCFD1-217ENST00000555953 OR5D16Q8NGK9 328 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 RAB37Q96AX2 223 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 LINC00052Q96N35 136 aa0.69□□□□□ -2.3
SCFD1-217ENST00000555953 ZNF714Q96N38 554 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms