RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 RPUSD4Q96CM3 377 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-203ENST00000555752 SHANK2-AS3Q9BTD1 123 aa12.92□□□□□ -0.34
SUPT16H-203ENST00000555752 PITX3O75364 302 aa12.91□□□□□ -0.34
SUPT16H-203ENST00000555752 NXPH4O95158 308 aa12.91□□□□□ -0.34
SUPT16H-203ENST00000555752 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
SUPT16H-203ENST00000555752 Q6ZSN1 163 aa12.91□□□□□ -0.34
SUPT16H-203ENST00000555752 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
SUPT16H-203ENST00000555752 CCDC28AQ8IWP9 274 aa12.91□□□□□ -0.34
SUPT16H-203ENST00000555752 SNURFLB1AK76 121 aa12.9□□□□□ -0.34
SUPT16H-203ENST00000555752 J3KRW8 73 aa12.9□□□□□ -0.34
SUPT16H-203ENST00000555752 SNRPCP09234 159 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-203ENST00000555752 RPL7P18124 248 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-203ENST00000555752 AKR1C1Q04828 323 aa12.9□□□□□ -0.34
SUPT16H-203ENST00000555752 LRRC20Q8TCA0 184 aa12.9□□□□□ -0.34
SUPT16H-203ENST00000555752 MIXL1Q9H2W2 232 aa12.9□□□□□ -0.34
SUPT16H-203ENST00000555752 A0A087X0K7 114 aa12.89□□□□□ -0.35
SUPT16H-203ENST00000555752 AKAIN1P0CW23 69 aa12.89□□□□□ -0.35
SUPT16H-203ENST00000555752 GCSHP23434 173 aa12.89□□□□□ -0.35
SUPT16H-203ENST00000555752 CLVS1Q8IUQ0 354 aaPredicted RBP12.89□□□□□ -0.35
SUPT16H-203ENST00000555752 HIGD1AQ9Y241 93 aa12.89□□□□□ -0.35
SUPT16H-203ENST00000555752 PRAC2D3DTV9 90 aa12.88□□□□□ -0.35
SUPT16H-203ENST00000555752 ACOT7LQ6ZUV0 252 aa12.88□□□□□ -0.35
SUPT16H-203ENST00000555752 CCDC190Q86UF4 302 aa12.88□□□□□ -0.35
SUPT16H-203ENST00000555752 PRRT1Q99946 306 aa12.88□□□□□ -0.35
SUPT16H-203ENST00000555752 C20orf144Q9BQM9 153 aa12.88□□□□□ -0.35
SUPT16H-203ENST00000555752 NAA50Q9GZZ1 169 aaKnown RBP12.88□□□□□ -0.35
SUPT16H-203ENST00000555752 VCX3AQ9NNX9 186 aa12.88□□□□□ -0.35
SUPT16H-203ENST00000555752 H3BP45 60 aa12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 WRBO00258 174 aa12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 OR5G3P0C626 314 aa12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 RAP2BP61225 183 aa12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 SSBP1Q04837 148 aaKnown RBP12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 CYP2G1PQ6ZSU1 146 aa12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 C15orf40Q8WUR7 153 aa12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 AP3S1Q92572 193 aa12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 HMCN2Q8NDA2 5059 aa12.87□□□□□ -0.35
SUPT16H-203ENST00000555752 A0A087WXM4 84 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 TRAV12-3A0A0B4J271 114 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 LINC00854A0A1B0GVQ3 168 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 PMS2P5A8MQ11 134 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 HYPMO75409 117 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 IL5P05113 134 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 S100A7P31151 101 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 SPANXN5Q5MJ07 72 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 SMIM4Q8WVI0 70 aa12.86□□□□□ -0.35
SUPT16H-203ENST00000555752 TRGV2A0A075B6R0 118 aa12.85□□□□□ -0.35
SUPT16H-203ENST00000555752 LINC00869P0C866 280 aa12.85□□□□□ -0.35
SUPT16H-203ENST00000555752 DAZ2Q13117 558 aaKnown RBP12.85□□□□□ -0.35
SUPT16H-203ENST00000555752 ZNF331Q9NQX6 463 aaPredicted RBP12.85□□□□□ -0.35
SUPT16H-203ENST00000555752 GSN-AS1Q9NRJ2 163 aa12.85□□□□□ -0.35
SUPT16H-203ENST00000555752 SMCO3A2RU48 225 aa12.84□□□□□ -0.35
SUPT16H-203ENST00000555752 H3BTX0 84 aa12.84□□□□□ -0.35
SUPT16H-203ENST00000555752 SRPXP78539 464 aa12.84□□□□□ -0.35
SUPT16H-203ENST00000555752 PATE2Q6UY27 113 aa12.84□□□□□ -0.35
SUPT16H-203ENST00000555752 NFE4Q86UQ8 179 aa12.84□□□□□ -0.35
SUPT16H-203ENST00000555752 SLC17A3O00476 420 aa12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 CTDSP2O14595 271 aa12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 SYNGR2O43760 224 aa12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 ANXA3P12429 323 aa12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 ANXA7P20073 488 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 PLP1P60201 277 aa12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 MRPS10P82664 201 aaKnown RBP12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 CTF1Q16619 201 aa12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 FUT9Q9Y231 359 aa12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 ICOSQ9Y6W8 199 aa12.83□□□□□ -0.36
SUPT16H-203ENST00000555752 TRGV1A0A0A0MS02 117 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 ANKRD20A5PA0PJZ0 165 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 RGS5O15539 181 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 PAX4O43316 350 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 MED6O75586 246 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 IGHV3-53P01767 116 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 CT45A10P0DMU9 189 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 RPP30P78346 268 aaKnown RBP12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 LYPD5Q6UWN5 251 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 C11orf72Q8NBR9 251 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 CIB3Q96Q77 187 aaPredicted RBP12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 MCUBQ9NWR8 336 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 MSRB1Q9NZV6 116 aa12.82□□□□□ -0.36
SUPT16H-203ENST00000555752 ZNF324O75467 553 aaPredicted RBP12.81□□□□□ -0.36
SUPT16H-203ENST00000555752 ZNF431Q8TF32 576 aaPredicted RBP12.81□□□□□ -0.36
SUPT16H-203ENST00000555752 ARL6Q9H0F7 186 aa12.81□□□□□ -0.36
SUPT16H-203ENST00000555752 SCP2D1Q9UJQ7 156 aa12.81□□□□□ -0.36
SUPT16H-203ENST00000555752 CCNKO75909 580 aa12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 LCN15Q6UWW0 184 aa12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 SCGB3A2Q96PL1 93 aa12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 ARV1Q9H2C2 271 aa12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 FAM30AQ9NZY2 134 aa12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 STRAPQ9Y3F4 350 aaKnown RBP12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 KLF12Q9Y4X4 402 aa12.8□□□□□ -0.36
SUPT16H-203ENST00000555752 IGLV5-52A0A0A0MRZ9 124 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 DUXBA0A1W2PPF3 345 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 KRTAP29-1A8MX34 341 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 SLC25A6P12236 298 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 CXCL2P19875 107 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 IL18Q14116 193 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 TEPPQ6URK8 271 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms