RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 STAG3L2P0CL84 134 aa15.32■□□□□ 0.04
FOXN3-209ENST00000555353 STAG3L3P0CL85 134 aa15.32■□□□□ 0.04
FOXN3-209ENST00000555353 ZNF726P1Q15940 193 aa15.32■□□□□ 0.04
FOXN3-209ENST00000555353 MORN5Q5VZ52 161 aa15.32■□□□□ 0.04
FOXN3-209ENST00000555353 LEMD1Q68G75 181 aa15.32■□□□□ 0.04
FOXN3-209ENST00000555353 SFT2D1Q8WV19 159 aa15.32■□□□□ 0.04
FOXN3-209ENST00000555353 MAP1LC3BQ9GZQ8 125 aa15.32■□□□□ 0.04
FOXN3-209ENST00000555353 TRAV5A0A0B4J249 113 aa15.31■□□□□ 0.04
FOXN3-209ENST00000555353 CXorf1O96002 111 aa15.31■□□□□ 0.04
FOXN3-209ENST00000555353 HBE1P02100 147 aa15.31■□□□□ 0.04
FOXN3-209ENST00000555353 NHLRC4P0CG21 123 aaPredicted RBP15.31■□□□□ 0.04
FOXN3-209ENST00000555353 C16orf54Q6UWD8 224 aa15.31■□□□□ 0.04
FOXN3-209ENST00000555353 LCN15Q6UWW0 184 aa15.31■□□□□ 0.04
FOXN3-209ENST00000555353 MBD3L1Q8WWY6 194 aa15.31■□□□□ 0.04
FOXN3-209ENST00000555353 SRD5A3Q9H8P0 318 aa15.31■□□□□ 0.04
FOXN3-209ENST00000555353 HELTA6NFD8 242 aa15.3■□□□□ 0.04
FOXN3-209ENST00000555353 HMGB3O15347 200 aaKnown RBP15.3■□□□□ 0.04
FOXN3-209ENST00000555353 GALR1P47211 349 aa15.3■□□□□ 0.04
FOXN3-209ENST00000555353 WFDC3Q8IUB2 231 aa15.3■□□□□ 0.04
FOXN3-209ENST00000555353 SBSPONQ8IVN8 264 aa15.3■□□□□ 0.04
FOXN3-209ENST00000555353 SLC25A2Q9BXI2 301 aa15.3■□□□□ 0.04
FOXN3-209ENST00000555353 MS4A6AQ9H2W1 248 aa15.3■□□□□ 0.04
FOXN3-209ENST00000555353 OR51M1Q9H341 326 aa15.3■□□□□ 0.04
FOXN3-209ENST00000555353 TMEM14CQ9P0S9 112 aa15.3■□□□□ 0.04
FOXN3-209ENST00000555353 COL7A1Q02388 2944 aa15.29■□□□□ 0.04
FOXN3-209ENST00000555353 PAXXQ9BUH6 204 aa15.29■□□□□ 0.04
FOXN3-209ENST00000555353 CMC4P56277 68 aaPredicted RBP15.28■□□□□ 0.04
FOXN3-209ENST00000555353 SIGLEC15Q6ZMC9 328 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 SSX7Q7RTT5 188 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 GLMPQ8WWB7 406 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 FAM167A-AS1Q96KT0 104 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 TRAV2A0A0B4J234 112 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 RGS13O14921 159 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 ARL14EPLP0DKL9 152 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 ATF4P18848 351 aaPredicted RBP15.28■□□□□ 0.04
FOXN3-209ENST00000555353 ODF3L2Q3SX64 289 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 IQCF2Q8IXL9 164 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 FAM110AQ9BQ89 295 aa15.28■□□□□ 0.04
FOXN3-209ENST00000555353 TRAV1-1A0A0B4J248 108 aa15.27■□□□□ 0.03
FOXN3-209ENST00000555353 EIF3GO75821 320 aaKnown RBP eCLIP15.27■□□□□ 0.03
FOXN3-209ENST00000555353 UBE2L3P68036 154 aaKnown RBP15.27■□□□□ 0.03
FOXN3-209ENST00000555353 TMEM167BQ9NRX6 74 aa15.27■□□□□ 0.03
FOXN3-209ENST00000555353 DNAH9Q9NYC9 4486 aa15.26■□□□□ 0.03
FOXN3-209ENST00000555353 HIST1H1EP10412 219 aaKnown RBP15.26■□□□□ 0.03
FOXN3-209ENST00000555353 GCHFRP30047 84 aa15.26■□□□□ 0.03
FOXN3-209ENST00000555353 MEOX2P50222 304 aa15.26■□□□□ 0.03
FOXN3-209ENST00000555353 FGF8P55075 233 aaPredicted RBP15.26■□□□□ 0.03
FOXN3-209ENST00000555353 PYYP10082 97 aa15.25■□□□□ 0.03
FOXN3-209ENST00000555353 GUK1Q16774 197 aa15.25■□□□□ 0.03
FOXN3-209ENST00000555353 A0A1B0GV50 99 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 RBMY1BA6NDE4 496 aaKnown RBP15.24■□□□□ 0.03
FOXN3-209ENST00000555353 RBMY1EA6NEQ0 496 aaKnown RBP15.24■□□□□ 0.03
FOXN3-209ENST00000555353 NMBP08949 121 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 OR10J4P0C629 311 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 RBMY1DP0C7P1 496 aaKnown RBP15.24■□□□□ 0.03
FOXN3-209ENST00000555353 PSMB3P49720 205 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 PPT1P50897 306 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 HAGHQ16775 308 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 HRH4Q9H3N8 390 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 ZMAT4Q9H898 229 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 NBEAP1P0C6P0 100 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 LINC00322Q6ZN03 302 aaPredicted RBP15.24■□□□□ 0.03
FOXN3-209ENST00000555353 ZNF503Q96F45 646 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 MAP6D1Q9H9H5 199 aa15.24■□□□□ 0.03
FOXN3-209ENST00000555353 A0A087X0K7 114 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 K7EQG2 157 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 MRPS12O15235 138 aaKnown RBP15.23■□□□□ 0.03
FOXN3-209ENST00000555353 IGLC2P0DOY2 106 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 CLLU1Q5K131 121 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 APRG1Q8IVJ8 170 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 DCANP1Q8TF63 244 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 FXYD5Q96DB9 178 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 CITED4Q96RK1 184 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 NRN1Q9NPD7 142 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 U3KQK5 164 aa15.23■□□□□ 0.03
FOXN3-209ENST00000555353 LOC102724200A0A096LPH7 203 aaPredicted RBP15.22■□□□□ 0.03
FOXN3-209ENST00000555353 SAMD13Q5VXD3 122 aa15.22■□□□□ 0.03
FOXN3-209ENST00000555353 PCNPQ8WW12 178 aaKnown RBP15.22■□□□□ 0.03
FOXN3-209ENST00000555353 IFNA1P01562 189 aa15.21■□□□□ 0.03
FOXN3-209ENST00000555353 DEFB131AP59861 70 aa15.21■□□□□ 0.03
FOXN3-209ENST00000555353 PDE6HQ13956 83 aa15.21■□□□□ 0.03
FOXN3-209ENST00000555353 FAM24BQ8N5W8 94 aa15.21■□□□□ 0.03
FOXN3-209ENST00000555353 LYPD6BQ8NI32 183 aa15.21■□□□□ 0.03
FOXN3-209ENST00000555353 BLNKQ8WV28 456 aa15.21■□□□□ 0.03
FOXN3-209ENST00000555353 TM2D3Q9BRN9 247 aa15.21■□□□□ 0.03
FOXN3-209ENST00000555353 TRBV19A0A075B6N1 114 aa15.2■□□□□ 0.02
FOXN3-209ENST00000555353 SPATA25Q9BR10 227 aa15.2■□□□□ 0.02
FOXN3-209ENST00000555353 TMPRSS5Q9H3S3 457 aa15.2■□□□□ 0.02
FOXN3-209ENST00000555353 ZNF586Q9NXT0 402 aa15.2■□□□□ 0.02
FOXN3-209ENST00000555353 H3BQ15 152 aa15.19■□□□□ 0.02
FOXN3-209ENST00000555353 ZNF253O75346 499 aa15.19■□□□□ 0.02
FOXN3-209ENST00000555353 ZNF688P0C7X2 276 aa15.19■□□□□ 0.02
FOXN3-209ENST00000555353 ZNF124Q15973 351 aa15.19■□□□□ 0.02
FOXN3-209ENST00000555353 SUN5Q8TC36 379 aa15.19■□□□□ 0.02
FOXN3-209ENST00000555353 SLC50A1Q9BRV3 221 aa15.19■□□□□ 0.02
FOXN3-209ENST00000555353 MANBALQ9NQG1 85 aa15.19■□□□□ 0.02
FOXN3-209ENST00000555353 SNRPCP09234 159 aaKnown RBP15.19■□□□□ 0.02
FOXN3-209ENST00000555353 SNRPD3P62318 126 aaKnown RBP15.19■□□□□ 0.02
FOXN3-209ENST00000555353 PSG9Q00887 426 aa15.19■□□□□ 0.02
FOXN3-209ENST00000555353 RCHY1Q96PM5 261 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms