RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 UBL3O95164 117 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 NDUFB2O95178 105 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 GADD45GO95257 159 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 SERPINA1P01009 418 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 OCM2P0CE71 109 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 CRYBB3P26998 211 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 CDC34P49427 236 aaPredicted RBP2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 EVX1P49640 407 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 TMEM33P57088 247 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 GLO1Q04760 184 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 COTL1Q14019 142 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 BAP18Q8IXM2 172 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 TEX29Q8N6K0 151 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 GNPDA2Q8TDQ7 276 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 SLC2A9Q9NRM0 540 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 SAMHD1Q9Y3Z3 626 aaKnown RBP2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 FAM215AQ9Y5M1 114 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 HYDINQ4G0P3 5121 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 ABCA4P78363 2273 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 DOPEY2Q9Y3R5 2298 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 INTS1Q8N201 2190 aaKnown RBP2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 HIVEP1P15822 2718 aa2.26□□□□□ -2.05
CKS1BP1-201ENST00000555221 EPPK1P58107 5090 aaKnown RBP2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 NUP210LQ5VU65 1888 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 CELSR1Q9NYQ6 3014 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 MUC21A0A0G2JKD1 596 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 MUC21A0A140T8X8 626 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 ARRDC5A6NEK1 342 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 CPSF4LA6NMK7 179 aaKnown RBP2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 RIIAD1A6NNX1 92 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 OR11H12B2RN74 326 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 FNDC10F2Z333 226 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 G3V2T6 193 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 M0R381 172 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 UBE2L6O14933 153 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 CD14P08571 375 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 ASAH2BP0C7U1 165 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 P0DMU3 169 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 FAM231AP0DMU4 169 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 FAM231CP0DMU5 169 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 COX5BP10606 129 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 IFI30P13284 250 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 CRYGSP22914 178 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 DDTP30046 118 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 CXCR4P61073 352 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 LSM6P62312 80 aaKnown RBP2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 HLA-DRB3P79483 266 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 HOXC5Q00444 222 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 TFF3Q07654 80 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 FAM27BQ5VT28 67 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 Q8NDZ9 215 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 OR2T4Q8NH00 348 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 OR11H2Q8NH07 326 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 HAVCR2Q8TDQ0 301 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 C11orf40Q8WZ69 217 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 VCX3BQ9H321 246 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 CMTM6Q9NX76 183 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 USE1Q9NZ43 259 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 GLTPQ9NZD2 209 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 ATPIF1Q9UII2 106 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 AP4S1Q9Y587 144 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 MPDZO75970 2070 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 ADGRG4Q8IZF6 3080 aa2.25□□□□□ -2.05
CKS1BP1-201ENST00000555221 A0A087WUU8 490 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 IGHV3-15A0A0B4J1V0 119 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 IRGMA1A4Y4 181 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 OR6C6A6NF89 314 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 CLDN24A6NM45 220 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 FXYD1O00168 92 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 TPST1O60507 370 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 IGHV1-69P01742 117 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 CST2P09228 141 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 CD79AP11912 226 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 MAGEA2P43356 314 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 SERPINB10P48595 397 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 CDC42P60953 191 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 SNRPD2P62316 118 aaKnown RBP2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 RPL18Q07020 188 aaKnown RBP2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 SS18Q15532 418 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 KCNJ8Q15842 424 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 NCMAPQ5T1S8 102 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 C10orf128Q5T292 105 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 LGALS9CQ6DKI2 356 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 RASSF6Q6ZTQ3 369 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 NAA40Q86UY6 237 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 C20orf196Q8IYI0 205 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 CLDN22Q8N7P3 220 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 TEX47Q8TBZ9 253 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 SPTSSAQ969W0 71 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 MRPS24Q96EL2 167 aaKnown RBP2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 GPX7Q96SL4 187 aaPredicted RBP2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 MIEN1Q9BRT3 115 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 ZNF471Q9BX82 626 aaPredicted RBP2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 CBLN4Q9NTU7 201 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 ARMC1Q9NVT9 282 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 IL20Q9NYY1 176 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 POLR1DQ9Y2S0 133 aa2.24□□□□□ -2.05
CKS1BP1-201ENST00000555221 ROS1P08922 2347 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 CPAMD8Q8IZJ3 1885 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms