RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 LOC389332A0A1B0GUA5 103 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 SHISA9B4DS77 424 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 CFHR2P36980 270 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 CD69Q07108 199 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 FAM201AQ5SY85 155 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 MOGAT3Q86VF5 341 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 DLL1O00548 723 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 ARMS2P0C7Q2 107 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 PPIFP30405 207 aaKnown RBP12.47□□□□□ -0.41
SYNE3-203ENST00000554873 RPL32P62910 135 aaKnown RBP12.47□□□□□ -0.41
SYNE3-203ENST00000554873 Q6AWC8 147 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 ZFAND6Q6FIF0 208 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 TTTY13Q9BZ97 58 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 CDX4O14627 284 aaPredicted RBP12.47□□□□□ -0.41
SYNE3-203ENST00000554873 CNIH1O95406 144 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 PRCDQ00LT1 54 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 TAL2Q16559 108 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 HES3Q5TGS1 186 aa12.47□□□□□ -0.41
SYNE3-203ENST00000554873 PRRG2O14669 202 aa12.46□□□□□ -0.41
SYNE3-203ENST00000554873 NDUFS7O75251 213 aa12.46□□□□□ -0.41
SYNE3-203ENST00000554873 SMIM20Q8N5G0 67 aa12.46□□□□□ -0.41
SYNE3-203ENST00000554873 ZNF71Q9NQZ8 489 aaPredicted RBP12.46□□□□□ -0.41
SYNE3-203ENST00000554873 K7EMI3 77 aa12.46□□□□□ -0.42
SYNE3-203ENST00000554873 CLEC3BP05452 202 aa12.46□□□□□ -0.42
SYNE3-203ENST00000554873 DUX4L9Q6RFH8 374 aaPredicted RBP12.46□□□□□ -0.42
SYNE3-203ENST00000554873 PATE2Q6UY27 113 aa12.46□□□□□ -0.42
SYNE3-203ENST00000554873 TNFRSF18Q9Y5U5 241 aa12.46□□□□□ -0.42
SYNE3-203ENST00000554873 DSCAML1Q8TD84 2053 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 FSTL3O95633 263 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 LHBP01229 141 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 CCL11P51671 97 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 ZNF562Q6V9R5 426 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 NFE4Q86UQ8 179 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 RND1Q92730 232 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 VCX2Q9H322 139 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 BRI3O95415 125 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 PAX8Q06710 450 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 CFAP126Q5VTH2 177 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 TEX29Q8N6K0 151 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.45□□□□□ -0.42
SYNE3-203ENST00000554873 OR1L8Q8NGR8 309 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 RITA1Q96K30 269 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 HHLA3Q9XRX5 114 aa12.45□□□□□ -0.42
SYNE3-203ENST00000554873 PRSS29PA6NIE9 313 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 POU2AF1Q16633 256 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 RAX2Q96IS3 184 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 SPENQ96T58 3664 aaKnown RBP12.44□□□□□ -0.42
SYNE3-203ENST00000554873 WI2-2373I1.2A0A1W2PRP0 233 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 SPRY3O43610 288 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 TCRAP04437 139 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 HLA-DRB4P13762 266 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 FXYD7P58549 80 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 ZMAT4Q9H898 229 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 SLC25A15Q9Y619 301 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 HLA-DRB4X5D2U9 266 aa12.44□□□□□ -0.42
SYNE3-203ENST00000554873 D6R8Y8 96 aa12.43□□□□□ -0.42
SYNE3-203ENST00000554873 UPK2O00526 184 aa12.43□□□□□ -0.42
SYNE3-203ENST00000554873 THBDP07204 575 aa12.43□□□□□ -0.42
SYNE3-203ENST00000554873 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
SYNE3-203ENST00000554873 FDCSPQ8NFU4 85 aa12.43□□□□□ -0.42
SYNE3-203ENST00000554873 U3KQK5 164 aa12.43□□□□□ -0.42
SYNE3-203ENST00000554873 IGKV1-16P04430 117 aa12.43□□□□□ -0.42
SYNE3-203ENST00000554873 SMCPP49901 116 aaPredicted RBP12.43□□□□□ -0.42
SYNE3-203ENST00000554873 OR10X1Q8NGY0 326 aa12.43□□□□□ -0.42
SYNE3-203ENST00000554873 NHLRC4P0CG21 123 aaPredicted RBP12.43□□□□□ -0.42
SYNE3-203ENST00000554873 LINC00305Q7Z4B0 112 aa12.43□□□□□ -0.42
SYNE3-203ENST00000554873 KLF17Q5JT82 389 aaPredicted RBP12.42□□□□□ -0.42
SYNE3-203ENST00000554873 ZNF493Q6ZR52 646 aa12.42□□□□□ -0.42
SYNE3-203ENST00000554873 Q86TA4 180 aa12.42□□□□□ -0.42
SYNE3-203ENST00000554873 CIARTQ8N365 385 aaPredicted RBP12.42□□□□□ -0.42
SYNE3-203ENST00000554873 SRSF12Q8WXF0 261 aaKnown RBP12.42□□□□□ -0.42
SYNE3-203ENST00000554873 HIF1ANQ9NWT6 349 aa12.42□□□□□ -0.42
SYNE3-203ENST00000554873 ZNRD1Q9P1U0 126 aa12.42□□□□□ -0.42
SYNE3-203ENST00000554873 DKK4Q9UBT3 224 aa12.42□□□□□ -0.42
SYNE3-203ENST00000554873 PROCRQ9UNN8 238 aa12.42□□□□□ -0.42
SYNE3-203ENST00000554873 EVI2AP22794 236 aa12.42□□□□□ -0.42
SYNE3-203ENST00000554873 PPDPFLQ8WWR9 84 aa12.42□□□□□ -0.42
SYNE3-203ENST00000554873 FAM90A27PA6NNH2 459 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 PLAUP00749 431 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 ORMDL3Q8N138 153 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 DEFB108BQ8NET1 73 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 HARBI1Q96MB7 349 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 ASPMQ8IZT6 3477 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 ODF1Q14990 250 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 TMEM133Q9H2Q1 129 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 RAB9BQ9NP90 201 aa12.41□□□□□ -0.42
SYNE3-203ENST00000554873 TANC2Q9HCD6 1990 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 GAGE12JA6NER3 117 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 M0R1B8 84 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 GAGE7O76087 117 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 GAGE12FP0CL80 117 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 GAGE12GP0CL81 117 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 GAGE12IP0CL82 117 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 GAGE4Q13068 117 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 PLA2G2CQ5R387 149 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 FAM169BQ8N8A8 192 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 DLX4Q92988 240 aaPredicted RBP12.4□□□□□ -0.42
SYNE3-203ENST00000554873 ARFGEF3Q5TH69 2177 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 ZFHX4Q86UP3 3567 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms