RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 TRAV8-2A0A0B4J237 113 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 PIGBOS1A0A0B4J2F0 54 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 UMAD1C9J7I0 102 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 F8WDY8 70 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 I3L521 148 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 DNASE2O00115 360 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-230ENST00000554673 ZNF207O43670 478 aaKnown RBP4.42□□□□□ -1.7
ATXN3-230ENST00000554673 IGLV2-11P01706 119 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 CSN3P07498 182 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 OR10J4P0C629 311 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 BCL2P10415 239 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 HILS1P60008 231 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 GNG5P63218 68 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 DEFB136Q30KP8 78 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 AKR1C8PQ5T2L2 129 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 IGFL4Q6B9Z1 124 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 CYB561D1Q8N8Q1 229 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 LINC01006Q8NI28 216 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 SCGB1C1Q8TD33 95 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 VN1R17PQ8TDU5 208 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 RXFP4Q8TDU9 374 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 DAZAP1Q96EP5 407 aaKnown RBP4.42□□□□□ -1.7
ATXN3-230ENST00000554673 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 SHANK2-AS3Q9BTD1 123 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 SLC25A39Q9BZJ4 359 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-230ENST00000554673 ENY2Q9NPA8 101 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 C11orf21Q9P2W6 132 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 FUT9Q9Y231 359 aa4.42□□□□□ -1.7
ATXN3-230ENST00000554673 IGHV3-66A0A0C4DH42 116 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 TMEM213A2RRL7 107 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 RBFOX3A6NFN3 312 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 ZFP92A6NM28 416 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 CLDN34H7C241 214 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 SOCS3O14543 225 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 MPDU1O75352 247 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 TRGV3P03979 118 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 SFTA3P0C7M3 94 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 CD28P10747 220 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 C4BPBP20851 252 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 ZP3P21754 424 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 AKR1C3P42330 323 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 RAB5CP51148 216 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 RAB9AP51151 201 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 PROK1P58294 105 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 UBE2G2P60604 165 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 YPEL3P61236 119 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-230ENST00000554673 BLOC1S1P78537 153 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 FHL2Q14192 279 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 FAM78BQ5VT40 261 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 DPPA3Q6W0C5 159 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 LINC00322Q6ZN03 302 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-230ENST00000554673 Q6ZQT7 251 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 C16orf82Q7Z2V1 217 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 PRIMA1Q86XR5 153 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 FAM24BQ8N5W8 94 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 NECAP1Q8NC96 275 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 OR1B1Q8NGR6 318 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 OR5R1Q8NH85 324 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 TVP23CQ96ET8 276 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 GNG13Q9P2W3 67 aa4.41□□□□□ -1.7
ATXN3-230ENST00000554673 PUS1Q9Y606 427 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATXN3-230ENST00000554673 K7EN84 100 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 TGOLN2O43493 480 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 FRMD6-AS1P0C7T7 363 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 C8orf88P0DMB2 117 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 CD99P14209 185 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 ORM2P19652 201 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 TPPP2P59282 170 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 LYZP61626 148 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 SCGB2A2Q13296 93 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 NDUFA5Q16718 116 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 ACOT6Q3I5F7 207 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-230ENST00000554673 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 SIGLEC15Q6ZMC9 328 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 LINC00305Q7Z4B0 112 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 TMEM86BQ8N661 226 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 OR5AU1Q8NGC0 362 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 OR4X2Q8NGF9 303 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 C11orf52Q96A22 123 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 IGF2BP2-AS1Q96M15 143 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 WWC2-AS2Q96NR7 200 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 NPFFR1Q9GZQ6 430 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 C16orf95Q9H693 158 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 DNAJC4Q9NNZ3 241 aa4.4□□□□□ -1.71
ATXN3-230ENST00000554673 AURKAIP1Q9NWT8 199 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF98A6NK75 572 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF727A8MUV8 499 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 M0R3E3 92 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 BUB3O43684 328 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 CRLF1O75462 422 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 IL4P05112 153 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 RD3LP0DJH9 198 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 PPT1P50897 306 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 SNRPEP62304 92 aaKnown RBP4.39□□□□□ -1.71
ATXN3-230ENST00000554673 EIF5AP63241 154 aaKnown RBP4.39□□□□□ -1.71
ATXN3-230ENST00000554673 Q56UQ5 140 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 C10orf113Q5VZT2 155 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 EXOC3-AS1Q8N2X6 119 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms