RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 POU2AF1Q16633 256 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 MLANAQ16655 118 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
SIX4-202ENST00000554079 C10orf113Q5VZT2 155 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 C15orf53Q8NAA6 179 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 OR1L4Q8NGR5 311 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 TRGV9Q99603 122 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 FOXC2Q99958 501 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 OCIAD1Q9NX40 245 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 CALYQ9NYX4 217 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 EYSQ5T1H1 3165 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 DEFB108AA8MXU0 73 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 J3KT08 172 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 HES3Q5TGS1 186 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 AMN1Q8IY45 258 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 Q8IYB0 196 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 SRSF12Q8WXF0 261 aaKnown RBP7.56□□□□□ -1.2
SIX4-202ENST00000554079 PROCRQ9UNN8 238 aa7.56□□□□□ -1.2
SIX4-202ENST00000554079 BRWD1Q9NSI6 2320 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 A0A1B0GX51 115 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 ATP5LO75964 103 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 DUSP14O95147 198 aaKnown RBP7.55□□□□□ -1.2
SIX4-202ENST00000554079 HOXB4P17483 251 aaPredicted RBP7.55□□□□□ -1.2
SIX4-202ENST00000554079 CD69Q07108 199 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 LINC01559Q495D7 138 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 C2orf83Q53S99 150 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 SFTA2Q6UW10 78 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 AAED1Q7RTV5 226 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 YAF2Q8IY57 180 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 IFI27L2Q9H2X8 130 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 UBTD1Q9HAC8 227 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 TRANK1O15050 2925 aa7.55□□□□□ -1.2
SIX4-202ENST00000554079 C9JAW5 83 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 H3BVH4 76 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 IGLV2-11P01706 119 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 TFF2Q03403 129 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 OR11H6Q8NGC7 330 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 NPIPB3Q92617 1050 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 TMEM101Q96IK0 257 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 FAM173AQ9BQD7 235 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 CHCHD5Q9BSY4 110 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 TPPP3Q9BW30 176 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 HIGD1AQ9Y241 93 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 TRAV40A0A0B4J280 105 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 PRSS1P07477 247 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 SCGB1C2P0DMR2 95 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 RNASE2P10153 161 aaKnown RBP7.54□□□□□ -1.2
SIX4-202ENST00000554079 PRCDQ00LT1 54 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 MRPL23Q16540 153 aaKnown RBP7.54□□□□□ -1.2
SIX4-202ENST00000554079 RPL39P5Q59GN2 51 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 RPP25Q9BUL9 199 aaKnown RBP7.54□□□□□ -1.2
SIX4-202ENST00000554079 TMEM160Q9NX00 188 aa7.54□□□□□ -1.2
SIX4-202ENST00000554079 FREM1Q5H8C1 2179 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 TRAV8-1A0A0A6YYK1 113 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 TRBV6-1A0A0K0K1D8 114 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 SMKR1H3BMG3 65 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 M0R2P5 195 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 NPFFO15130 113 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 SLC25A20O43772 301 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 CD7P09564 240 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 LEPP41159 167 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 KIR2DL1P43626 348 aaPredicted RBP7.53□□□□□ -1.2
SIX4-202ENST00000554079 OR13A1Q8NGR1 328 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 FAM57AQ8TBR7 257 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 S1PR3Q99500 378 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
SIX4-202ENST00000554079 CHCHD2Q9Y6H1 151 aaPredicted RBP7.53□□□□□ -1.2
SIX4-202ENST00000554079 MYO7AQ13402 2215 aa7.53□□□□□ -1.2
SIX4-202ENST00000554079 NDUFA7O95182 113 aa7.52□□□□□ -1.2
SIX4-202ENST00000554079 PLAUP00749 431 aa7.52□□□□□ -1.2
SIX4-202ENST00000554079 LGALS1P09382 135 aaKnown RBP7.52□□□□□ -1.2
SIX4-202ENST00000554079 FOXC1Q12948 553 aa7.52□□□□□ -1.2
SIX4-202ENST00000554079 FAM90A1Q86YD7 464 aa7.52□□□□□ -1.2
SIX4-202ENST00000554079 Q8N1Y9 231 aa7.52□□□□□ -1.2
SIX4-202ENST00000554079 Q9H3A6 140 aa7.52□□□□□ -1.2
SIX4-202ENST00000554079 TNCP24821 2201 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 PRUNE2Q8WUY3 3088 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 IGKV1D-37A0A075B6S9 117 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 ZNF503-AS2A6NEH8 195 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 LILRA5A6NI73 299 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 NCBP2LA6PVI3 153 aaKnown RBP7.52□□□□□ -1.21
SIX4-202ENST00000554079 DNPH1O43598 174 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 ZNF134P52741 427 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 ZNF474Q6S9Z5 364 aaPredicted RBP7.52□□□□□ -1.21
SIX4-202ENST00000554079 C1orf229Q6ZS94 237 aaPredicted RBP7.52□□□□□ -1.21
SIX4-202ENST00000554079 LINC00305Q7Z4B0 112 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 ONECUT1Q9UBC0 465 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 CNTRLQ7Z7A1 2325 aa7.52□□□□□ -1.21
SIX4-202ENST00000554079 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 TRBV7-7A0A0K0K1E9 115 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 GP9P14770 177 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 PRNTQ86SH4 94 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 OR13C6PQ8NH95 151 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 FLYWCH2Q96CP2 140 aaKnown RBP7.51□□□□□ -1.21
SIX4-202ENST00000554079 PRADC1Q9BSG0 188 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 RTL8AQ9BWD3 113 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 INTS1Q8N201 2190 aaKnown RBP7.51□□□□□ -1.21
SIX4-202ENST00000554079 C5orf42Q9H799 3197 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms