RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 YTHDF2Q9Y5A9 579 aaKnown RBP2.42□□□□□ -2.02
ATXN3-217ENST00000553287 IGKV1D-13A0A0B4J2D9 117 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 A0A0J9YY99 117 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 ZNF705GA8MUZ8 300 aaPredicted RBP2.41□□□□□ -2.02
ATXN3-217ENST00000553287 K7EMT4 169 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 FABP7O15540 132 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 DCTN3O75935 186 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 IFNA5P01569 189 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 IGKV1-13P0DP09 117 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 PTHLHP12272 177 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 HIST1H1BP16401 226 aaKnown RBP2.41□□□□□ -2.02
ATXN3-217ENST00000553287 HLA-GP17693 338 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 SRMP19623 302 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 PAFAH1B2P68402 229 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 QRFPP83859 136 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 Q499Y3 187 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 TMEM69Q5SWH9 247 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 RPL22L1Q6P5R6 122 aaKnown RBP2.41□□□□□ -2.02
ATXN3-217ENST00000553287 TOMM20LQ6UXN7 152 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 Q6ZN92 141 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 PUSL1Q8N0Z8 303 aaKnown RBP2.41□□□□□ -2.02
ATXN3-217ENST00000553287 SYS1Q8N2H4 156 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.41□□□□□ -2.02
ATXN3-217ENST00000553287 OR10J5Q8NHC4 309 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 TMEM167AQ8TBQ9 72 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 SLC25A46Q96AG3 418 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 PGLYRP3Q96LB9 341 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 LINC00477Q96M19 166 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 CMSS1Q9BQ75 279 aaKnown RBP2.41□□□□□ -2.02
ATXN3-217ENST00000553287 ZNF2Q9BSG1 426 aaPredicted RBP2.41□□□□□ -2.02
ATXN3-217ENST00000553287 TMEM59Q9BXS4 323 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 GABARAPL3Q9BY60 117 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 SLC35B3Q9H1N7 401 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 CKLFQ9UBR5 152 aa2.41□□□□□ -2.02
ATXN3-217ENST00000553287 AK6Q9Y3D8 172 aaKnown RBP2.41□□□□□ -2.02
ATXN3-217ENST00000553287 A0A087WTM6 91 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 TRBV6-7A0A0A0MS04 114 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 TEX50A0A1B0GTY4 177 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 TCRBV3S1A0A5B6 114 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 ZNF705FA8MVS1 300 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 TMEM14DPA8MWL7 114 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 F6UB75 175 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 F8WDY8 70 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 H3BMM0 161 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 SULT1C2O00338 296 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 ATP8B1O43520 1251 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 DIRAS3O95661 229 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 DHFRP00374 187 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 SERPINE2P07093 398 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 ZNF705DP0CH99 300 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 ZNF705BP0CI00 300 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 CCL18P55774 89 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 CMC4P56277 68 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 DHRS2Q13268 280 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 TMED1Q13445 227 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 FLOT2Q14254 428 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 CLINT1Q14677 625 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 ESRGQ1W209 222 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 KLK9Q2XQG4 91 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 YIF1BQ5BJH7 314 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 SPINK9Q5DT21 86 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 Q5W150 140 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 GLT8D1Q68CQ7 371 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 ZNF773Q6PK81 442 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 ZNF705AQ6ZN79 300 aaPredicted RBP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 C1orf158Q8N1D5 194 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 ARRDC1Q8N5I2 433 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 GDPD1Q8N9F7 314 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 OR4A4PQ8NGN8 299 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 DCANP1Q8TF63 244 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 APH1BQ8WW43 257 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 DNAJC9Q8WXX5 260 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 SMIM19Q96E16 107 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 NRBF2Q96F24 287 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 OR10C1Q96KK4 312 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 DERL3Q96Q80 235 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 GINS4Q9BRT9 223 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 NXF2Q9GZY0 626 aaKnown RBP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 GABARAPL1Q9H0R8 117 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 VSIRQ9H7M9 311 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 C12orf4Q9NQ89 552 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 BABAM2Q9NXR7 383 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 MRPL36Q9P0J6 103 aaKnown RBP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 KLK9Q9UKQ9 250 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 RBMX2Q9Y388 322 aaKnown RBP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 PUS1Q9Y606 427 aaKnown RBP eCLIP2.4□□□□□ -2.03
ATXN3-217ENST00000553287 RFNGQ9Y644 331 aa2.4□□□□□ -2.03
ATXN3-217ENST00000553287 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 COLCA2A8K830 154 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 UPK2O00526 184 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 CREBL2O60519 120 aaPredicted RBP2.39□□□□□ -2.03
ATXN3-217ENST00000553287 MT-CO2P00403 227 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 EIF4EP06730 217 aaKnown RBP2.39□□□□□ -2.03
ATXN3-217ENST00000553287 CELP19835 753 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 P2RY1P47900 373 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 TAS2R43P59537 309 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 OR5I1Q13606 314 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 TPBGQ13641 420 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 KIAA0087Q14695 138 aa2.39□□□□□ -2.03
ATXN3-217ENST00000553287 USF2Q15853 346 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms