RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 H3BNG1 76 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 WRBO00258 174 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 GAGE7O76087 117 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 RLN2P04090 185 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 GAGE12FP0CL80 117 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 GAGE12GP0CL81 117 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 GAGE12IP0CL82 117 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 FUSP35637 526 aaKnown RBP eCLIP11.24□□□□□ -0.61
RAB5C-209ENST00000552162 Q5VSD8 79 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 LRRC20Q8TCA0 184 aa11.24□□□□□ -0.61
RAB5C-209ENST00000552162 RPUSD4Q96CM3 377 aaKnown RBP11.24□□□□□ -0.61
RAB5C-209ENST00000552162 FAT1Q14517 4588 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 SYNGR2O43760 224 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 IL5P05113 134 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 SLC25A6P12236 298 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 XGP55808 180 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 KIR3DS1Q14943 382 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 SPANXN5Q5MJ07 72 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 CCDC28AQ8IWP9 274 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 C20orf144Q9BQM9 153 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
RAB5C-209ENST00000552162 SMCO3A2RU48 225 aa11.22□□□□□ -0.61
RAB5C-209ENST00000552162 H3BP45 60 aa11.22□□□□□ -0.61
RAB5C-209ENST00000552162 HYPMO75409 117 aa11.22□□□□□ -0.61
RAB5C-209ENST00000552162 OR5G3P0C626 314 aa11.22□□□□□ -0.61
RAB5C-209ENST00000552162 LINC00869P0C866 280 aa11.22□□□□□ -0.61
RAB5C-209ENST00000552162 FRZBQ92765 325 aa11.22□□□□□ -0.61
RAB5C-209ENST00000552162 DIRAS2Q96HU8 199 aa11.22□□□□□ -0.61
RAB5C-209ENST00000552162 TMPRSS5Q9H3S3 457 aa11.22□□□□□ -0.61
RAB5C-209ENST00000552162 SNURFLB1AK76 121 aa11.21□□□□□ -0.61
RAB5C-209ENST00000552162 EREGO14944 169 aa11.21□□□□□ -0.61
RAB5C-209ENST00000552162 ERVFC1-1P60608 527 aa11.21□□□□□ -0.61
RAB5C-209ENST00000552162 GFI1BQ5VTD9 330 aa11.21□□□□□ -0.61
RAB5C-209ENST00000552162 CDPF1Q6NVV7 123 aa11.21□□□□□ -0.61
RAB5C-209ENST00000552162 TMED4Q7Z7H5 227 aa11.21□□□□□ -0.61
RAB5C-209ENST00000552162 PARD6GQ9BYG4 376 aaPredicted RBP11.21□□□□□ -0.61
RAB5C-209ENST00000552162 RABL2AQ9UBK7 228 aaPredicted RBP11.21□□□□□ -0.61
RAB5C-209ENST00000552162 RABL2BQ9UNT1 228 aa11.21□□□□□ -0.61
RAB5C-209ENST00000552162 A0A096LPF7 62 aa11.2□□□□□ -0.62
RAB5C-209ENST00000552162 VAMP1P23763 118 aa11.2□□□□□ -0.62
RAB5C-209ENST00000552162 PLP1P60201 277 aa11.2□□□□□ -0.62
RAB5C-209ENST00000552162 TMEM128Q5BJH2 165 aa11.2□□□□□ -0.62
RAB5C-209ENST00000552162 LRTM2Q8N967 370 aa11.2□□□□□ -0.62
RAB5C-209ENST00000552162 STRAPQ9Y3F4 350 aaKnown RBP11.2□□□□□ -0.62
RAB5C-209ENST00000552162 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-209ENST00000552162 SRRM2Q9UQ35 2752 aaKnown RBP11.19□□□□□ -0.62
RAB5C-209ENST00000552162 PMS2P5A8MQ11 134 aa11.19□□□□□ -0.62
RAB5C-209ENST00000552162 SIVA1O15304 175 aa11.19□□□□□ -0.62
RAB5C-209ENST00000552162 LCN15Q6UWW0 184 aa11.19□□□□□ -0.62
RAB5C-209ENST00000552162 CCDC190Q86UF4 302 aa11.19□□□□□ -0.62
RAB5C-209ENST00000552162 VSIG2Q96IQ7 327 aa11.19□□□□□ -0.62
RAB5C-209ENST00000552162 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
RAB5C-209ENST00000552162 CXCL2P19875 107 aa11.18□□□□□ -0.62
RAB5C-209ENST00000552162 ANXA7P20073 488 aaKnown RBP11.18□□□□□ -0.62
RAB5C-209ENST00000552162 SELENOTP62341 195 aa11.18□□□□□ -0.62
RAB5C-209ENST00000552162 Q6ZTI0 123 aa11.18□□□□□ -0.62
RAB5C-209ENST00000552162 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
RAB5C-209ENST00000552162 SLC50A1Q9BRV3 221 aa11.18□□□□□ -0.62
RAB5C-209ENST00000552162 ARL6Q9H0F7 186 aa11.18□□□□□ -0.62
RAB5C-209ENST00000552162 ZNF331Q9NQX6 463 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-209ENST00000552162 J3KRW8 73 aa11.17□□□□□ -0.62
RAB5C-209ENST00000552162 SPCS2Q15005 226 aa11.17□□□□□ -0.62
RAB5C-209ENST00000552162 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
RAB5C-209ENST00000552162 ARV1Q9H2C2 271 aa11.17□□□□□ -0.62
RAB5C-209ENST00000552162 RSL24D1Q9UHA3 163 aaKnown RBP11.17□□□□□ -0.62
RAB5C-209ENST00000552162 HOXB5P09067 269 aa11.16□□□□□ -0.62
RAB5C-209ENST00000552162 SNRPCP09234 159 aaKnown RBP11.16□□□□□ -0.62
RAB5C-209ENST00000552162 DNAH10OSP0CZ25 163 aa11.16□□□□□ -0.62
RAB5C-209ENST00000552162 KRTAP10-1P60331 282 aa11.16□□□□□ -0.62
RAB5C-209ENST00000552162 DAZ2Q13117 558 aaKnown RBP11.16□□□□□ -0.62
RAB5C-209ENST00000552162 RNF24Q9Y225 148 aa11.16□□□□□ -0.62
RAB5C-209ENST00000552162 TRGV2A0A075B6R0 118 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 PRAC2D3DTV9 90 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 SLC17A3O00476 420 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 NXPH4O95158 308 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 IFNA5P01569 189 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 SMIM18P0DKX4 95 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 FAUP35544 74 aaKnown RBP11.15□□□□□ -0.62
RAB5C-209ENST00000552162 RRAS2P62070 204 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-209ENST00000552162 PYGO2Q9BRQ0 406 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 TNFRSF18Q9Y5U5 241 aa11.15□□□□□ -0.62
RAB5C-209ENST00000552162 A0A087WTM6 91 aa11.14□□□□□ -0.63
RAB5C-209ENST00000552162 SFT2D2O95562 160 aa11.14□□□□□ -0.63
RAB5C-209ENST00000552162 SLC38A11Q08AI6 406 aa11.14□□□□□ -0.63
RAB5C-209ENST00000552162 PPP1R1AQ13522 171 aa11.14□□□□□ -0.63
RAB5C-209ENST00000552162 ICAM4Q14773 271 aa11.14□□□□□ -0.63
RAB5C-209ENST00000552162 LINC00305Q7Z4B0 112 aa11.14□□□□□ -0.63
RAB5C-209ENST00000552162 C18orf15Q96N68 181 aa11.14□□□□□ -0.63
RAB5C-209ENST00000552162 PSENENQ9NZ42 101 aa11.14□□□□□ -0.63
RAB5C-209ENST00000552162 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
RAB5C-209ENST00000552162 H3BTX0 84 aa11.13□□□□□ -0.63
RAB5C-209ENST00000552162 K7EPK0 472 aa11.13□□□□□ -0.63
RAB5C-209ENST00000552162 CCNKO75909 580 aa11.13□□□□□ -0.63
RAB5C-209ENST00000552162 SMR3BP02814 79 aaPredicted RBP11.13□□□□□ -0.63
RAB5C-209ENST00000552162 LEPP41159 167 aa11.13□□□□□ -0.63
RAB5C-209ENST00000552162 POLR2GP62487 172 aaKnown RBP eCLIP11.13□□□□□ -0.63
RAB5C-209ENST00000552162 NFE4Q86UQ8 179 aa11.13□□□□□ -0.63
RAB5C-209ENST00000552162 BPIFA4PQ86YQ2 179 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms