RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 NIT2Q9NQR4 276 aa0.3□□□□□ -2.36
SCAF11-215ENST00000551391 PRNDQ9UKY0 176 aa0.3□□□□□ -2.36
SCAF11-215ENST00000551391 USP24Q9UPU5 2620 aa0.3□□□□□ -2.36
SCAF11-215ENST00000551391 ERBINQ96RT1 1412 aa0.3□□□□□ -2.36
SCAF11-215ENST00000551391 TET1Q8NFU7 2136 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 APCP25054 2843 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 DOCK4Q8N1I0 1966 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 TRAV5A0A0B4J249 113 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 G3V2T6 193 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 PXT1Q8NFP0 134 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 CHMP6Q96FZ7 201 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 OR2J1Q9GZK6 312 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 WFDC10AQ9H1F0 79 aa0.29□□□□□ -2.36
SCAF11-215ENST00000551391 CACYBPQ9HB71 228 aaKnown RBP0.29□□□□□ -2.36
SCAF11-215ENST00000551391 CHD3Q12873 2000 aaKnown RBP0.29□□□□□ -2.36
SCAF11-215ENST00000551391 PTPRFP10586 1907 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 FREM3P0C091 2139 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 hDV103S1A0JD37 113 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 ATG12O94817 140 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 TRGC2P03986 189 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 IFNA4P05014 189 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 INSL3P51460 131 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 ARF6P62330 175 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 KLRD1Q13241 179 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 S100A7AQ86SG5 101 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 LRRC18Q8N456 261 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 OR4K15Q8NH41 348 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 ZHX1-C8orf76Q96EF9 292 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 ZNF714Q96N38 554 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 SH3BGRL3Q9H299 93 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 TCEAL2Q9H3H9 227 aaPredicted RBP0.28□□□□□ -2.36
SCAF11-215ENST00000551391 LYRM2Q9NU23 88 aaPredicted RBP0.28□□□□□ -2.36
SCAF11-215ENST00000551391 PLAC8Q9NZF1 115 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 MGAMO43451 1857 aa0.28□□□□□ -2.36
SCAF11-215ENST00000551391 CAMSAP2Q08AD1 1489 aa0.28□□□□□ -2.37
SCAF11-215ENST00000551391 MUC4Q99102 2169 aa0.28□□□□□ -2.37
SCAF11-215ENST00000551391 FRMPD1Q5SYB0 1578 aa0.28□□□□□ -2.37
SCAF11-215ENST00000551391 NAV3Q8IVL0 2385 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 NUP210LQ5VU65 1888 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 H7C1C5 153 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 IFNA14P01570 189 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 CXCL1P09341 107 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 ARPP19P56211 112 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 LCN6P62502 163 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 GNG5P63218 68 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 IFT20Q8IY31 132 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 GPX7Q96SL4 187 aaPredicted RBP0.27□□□□□ -2.37
SCAF11-215ENST00000551391 MAP1LC3BQ9GZQ8 125 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 RNF11Q9Y3C5 154 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 BCL9O00512 1426 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 CD109Q6YHK3 1445 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 PIK3C2AO00443 1686 aa0.27□□□□□ -2.37
SCAF11-215ENST00000551391 MYO5AQ9Y4I1 1855 aaKnown RBP0.27□□□□□ -2.37
SCAF11-215ENST00000551391 RIIAD1A6NNX1 92 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 HIST1H2BKO60814 126 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 APOA2P02652 100 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 HIST1H2BJP06899 126 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 OGNP20774 298 aaKnown RBP0.26□□□□□ -2.37
SCAF11-215ENST00000551391 PHBP35232 272 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 TMBIM6P55061 237 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 AKR1C8PQ5T2L2 129 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 Q6ZS92 163 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 SSR3Q9UNL2 185 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 ASB4Q9Y574 426 aa0.26□□□□□ -2.37
SCAF11-215ENST00000551391 TRBV30A0A0K0K1B3 111 aa0.25□□□□□ -2.37
SCAF11-215ENST00000551391 C9orf170A2RU37 121 aa0.25□□□□□ -2.37
SCAF11-215ENST00000551391 RER1O15258 196 aa0.25□□□□□ -2.37
SCAF11-215ENST00000551391 IGHV3-33P01772 117 aa0.25□□□□□ -2.37
SCAF11-215ENST00000551391 CEP19Q96LK0 163 aa0.25□□□□□ -2.37
SCAF11-215ENST00000551391 PAIP2Q9BPZ3 127 aaKnown RBP0.25□□□□□ -2.37
SCAF11-215ENST00000551391 TRAV23DV6A0A075B6W5 121 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 K7ERJ3 54 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 LYRM1O43325 122 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 CD14P08571 375 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 KRTAP2-3P0C7H8 128 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 IDO1P14902 403 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 EIF3IQ13347 325 aaKnown RBP0.24□□□□□ -2.37
SCAF11-215ENST00000551391 C1orf140Q5VVS0 124 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 LINC00299Q6ZSB3 139 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 PHF5AQ7RTV0 110 aaKnown RBP0.24□□□□□ -2.37
SCAF11-215ENST00000551391 NUP35Q8NFH5 326 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 MALSU1Q96EH3 234 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 GINS3Q9BRX5 216 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 RTL8AQ9BWD3 113 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 KRTAP2-4Q9BYR9 128 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 KRTAP2-1Q9BYU5 128 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 ASH1LQ9NR48 2969 aaKnown RBP0.24□□□□□ -2.37
SCAF11-215ENST00000551391 JPT1Q9UK76 154 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 FANCMQ8IYD8 2048 aa0.24□□□□□ -2.37
SCAF11-215ENST00000551391 EIF3AQ14152 1382 aaKnown RBP0.23□□□□□ -2.37
SCAF11-215ENST00000551391 C5orf67F2Z3F1 127 aa0.23□□□□□ -2.37
SCAF11-215ENST00000551391 IFNA1P01562 189 aa0.23□□□□□ -2.37
SCAF11-215ENST00000551391 CCL4P13236 92 aa0.23□□□□□ -2.37
SCAF11-215ENST00000551391 ZNF137PP52743 207 aa0.23□□□□□ -2.37
SCAF11-215ENST00000551391 SPINK7P58062 85 aa0.23□□□□□ -2.37
SCAF11-215ENST00000551391 FXYD6P3P58550 94 aa0.23□□□□□ -2.37
SCAF11-215ENST00000551391 MRPS15P82914 257 aaKnown RBP0.23□□□□□ -2.37
SCAF11-215ENST00000551391 HACD4Q5VWC8 232 aa0.23□□□□□ -2.37
SCAF11-215ENST00000551391 FOXI2Q6ZQN5 318 aa0.23□□□□□ -2.37
SCAF11-215ENST00000551391 PBDC1Q9BVG4 233 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms