RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 WRBO00258 174 aa12.72□□□□□ -0.37
RPAP3-207ENST00000551293 ADAP1O75689 374 aa12.72□□□□□ -0.37
RPAP3-207ENST00000551293 CCDC28AQ8IWP9 274 aa12.72□□□□□ -0.37
RPAP3-207ENST00000551293 PRRT1Q99946 306 aa12.72□□□□□ -0.37
RPAP3-207ENST00000551293 SHANK2-AS3Q9BTD1 123 aa12.72□□□□□ -0.37
RPAP3-207ENST00000551293 SMCO3A2RU48 225 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 PRSS46E5RG02 174 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 H3BP45 60 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 RGS5O15539 181 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 IFNA5P01569 189 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 OR5G3P0C626 314 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 Q6ZTI0 123 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 C15orf40Q8WUR7 153 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 VSIG2Q96IQ7 327 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 HIGD1AQ9Y241 93 aa12.71□□□□□ -0.37
RPAP3-207ENST00000551293 SNURFLB1AK76 121 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 SIVA1O15304 175 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 PITX3O75364 302 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 RPL7P18124 248 aaKnown RBP12.7□□□□□ -0.38
RPAP3-207ENST00000551293 RAP2BP61225 183 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 SPANXN5Q5MJ07 72 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 GFI1BQ5VTD9 330 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 ACOT7LQ6ZUV0 252 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 CCDC190Q86UF4 302 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 MCUBQ9NWR8 336 aa12.7□□□□□ -0.38
RPAP3-207ENST00000551293 H3BTX0 84 aa12.69□□□□□ -0.38
RPAP3-207ENST00000551293 J3QL48 77 aa12.69□□□□□ -0.38
RPAP3-207ENST00000551293 CTDSP2O14595 271 aa12.69□□□□□ -0.38
RPAP3-207ENST00000551293 NXPH4O95158 308 aa12.69□□□□□ -0.38
RPAP3-207ENST00000551293 IL5P05113 134 aa12.69□□□□□ -0.38
RPAP3-207ENST00000551293 SSBP1Q04837 148 aaKnown RBP12.69□□□□□ -0.38
RPAP3-207ENST00000551293 ICAM4Q14773 271 aa12.69□□□□□ -0.38
RPAP3-207ENST00000551293 CYP2G1PQ6ZSU1 146 aa12.69□□□□□ -0.38
RPAP3-207ENST00000551293 SMIM4Q8WVI0 70 aa12.69□□□□□ -0.38
RPAP3-207ENST00000551293 A0A087WTM6 91 aa12.68□□□□□ -0.38
RPAP3-207ENST00000551293 PRAC2D3DTV9 90 aa12.68□□□□□ -0.38
RPAP3-207ENST00000551293 HYPMO75409 117 aa12.68□□□□□ -0.38
RPAP3-207ENST00000551293 ANXA3P12429 323 aa12.68□□□□□ -0.38
RPAP3-207ENST00000551293 S100A7P31151 101 aa12.68□□□□□ -0.38
RPAP3-207ENST00000551293 CDPF1Q6NVV7 123 aa12.68□□□□□ -0.38
RPAP3-207ENST00000551293 TMED4Q7Z7H5 227 aa12.68□□□□□ -0.38
RPAP3-207ENST00000551293 TRAV12-3A0A0B4J271 114 aa12.67□□□□□ -0.38
RPAP3-207ENST00000551293 PMS2P5A8MQ11 134 aa12.67□□□□□ -0.38
RPAP3-207ENST00000551293 H3BNG1 76 aa12.67□□□□□ -0.38
RPAP3-207ENST00000551293 LINC00869P0C866 280 aa12.67□□□□□ -0.38
RPAP3-207ENST00000551293 ANXA7P20073 488 aaKnown RBP12.67□□□□□ -0.38
RPAP3-207ENST00000551293 IL18Q14116 193 aa12.67□□□□□ -0.38
RPAP3-207ENST00000551293 CTF1Q16619 201 aa12.67□□□□□ -0.38
RPAP3-207ENST00000551293 TRGV2A0A075B6R0 118 aa12.66□□□□□ -0.38
RPAP3-207ENST00000551293 A0A087X0K7 114 aa12.66□□□□□ -0.38
RPAP3-207ENST00000551293 SYNGR2O43760 224 aa12.66□□□□□ -0.38
RPAP3-207ENST00000551293 SRPXP78539 464 aa12.66□□□□□ -0.38
RPAP3-207ENST00000551293 MRPS10P82664 201 aaKnown RBP12.66□□□□□ -0.38
RPAP3-207ENST00000551293 SCP2D1Q9UJQ7 156 aa12.66□□□□□ -0.38
RPAP3-207ENST00000551293 FAM229AH3BQW9 127 aa12.65□□□□□ -0.38
RPAP3-207ENST00000551293 MED6O75586 246 aa12.65□□□□□ -0.38
RPAP3-207ENST00000551293 RPP30P78346 268 aaKnown RBP12.65□□□□□ -0.38
RPAP3-207ENST00000551293 SCGB3A2Q96PL1 93 aa12.65□□□□□ -0.38
RPAP3-207ENST00000551293 ARL6Q9H0F7 186 aa12.65□□□□□ -0.38
RPAP3-207ENST00000551293 LINC00854A0A1B0GVQ3 168 aa12.64□□□□□ -0.39
RPAP3-207ENST00000551293 ANKRD20A5PA0PJZ0 165 aa12.64□□□□□ -0.39
RPAP3-207ENST00000551293 RRAS2P62070 204 aaPredicted RBP12.64□□□□□ -0.39
RPAP3-207ENST00000551293 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
RPAP3-207ENST00000551293 CIB3Q96Q77 187 aaPredicted RBP12.64□□□□□ -0.39
RPAP3-207ENST00000551293 GSN-AS1Q9NRJ2 163 aa12.64□□□□□ -0.39
RPAP3-207ENST00000551293 SLC17A3O00476 420 aa12.63□□□□□ -0.39
RPAP3-207ENST00000551293 MRPS12O15235 138 aaKnown RBP12.63□□□□□ -0.39
RPAP3-207ENST00000551293 IGHV3-53P01767 116 aa12.63□□□□□ -0.39
RPAP3-207ENST00000551293 HOXB5P09067 269 aa12.63□□□□□ -0.39
RPAP3-207ENST00000551293 GCSHP23434 173 aa12.63□□□□□ -0.39
RPAP3-207ENST00000551293 VAMP1P23763 118 aa12.63□□□□□ -0.39
RPAP3-207ENST00000551293 Q6ZSN1 163 aa12.63□□□□□ -0.39
RPAP3-207ENST00000551293 DIRAS2Q96HU8 199 aa12.63□□□□□ -0.39
RPAP3-207ENST00000551293 C20orf144Q9BQM9 153 aa12.63□□□□□ -0.39
RPAP3-207ENST00000551293 STRAPQ9Y3F4 350 aaKnown RBP12.63□□□□□ -0.39
RPAP3-207ENST00000551293 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
RPAP3-207ENST00000551293 CCNKO75909 580 aa12.62□□□□□ -0.39
RPAP3-207ENST00000551293 CT45A10P0DMU9 189 aa12.62□□□□□ -0.39
RPAP3-207ENST00000551293 ARV1Q9H2C2 271 aa12.62□□□□□ -0.39
RPAP3-207ENST00000551293 ZNF331Q9NQX6 463 aaPredicted RBP12.62□□□□□ -0.39
RPAP3-207ENST00000551293 DAZ2Q13117 558 aaKnown RBP12.61□□□□□ -0.39
RPAP3-207ENST00000551293 RABL2BQ9UNT1 228 aa12.61□□□□□ -0.39
RPAP3-207ENST00000551293 FUT9Q9Y231 359 aa12.61□□□□□ -0.39
RPAP3-207ENST00000551293 ICOSQ9Y6W8 199 aa12.61□□□□□ -0.39
RPAP3-207ENST00000551293 DUXBA0A1W2PPF3 345 aa12.6□□□□□ -0.39
RPAP3-207ENST00000551293 CTDSPLO15194 276 aa12.6□□□□□ -0.39
RPAP3-207ENST00000551293 PAX4O43316 350 aa12.6□□□□□ -0.39
RPAP3-207ENST00000551293 PLP1P60201 277 aa12.6□□□□□ -0.39
RPAP3-207ENST00000551293 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
RPAP3-207ENST00000551293 LCN15Q6UWW0 184 aa12.6□□□□□ -0.39
RPAP3-207ENST00000551293 ZBTB8BQ8NAP8 495 aaPredicted RBP12.6□□□□□ -0.39
RPAP3-207ENST00000551293 ZNF431Q8TF32 576 aaPredicted RBP12.6□□□□□ -0.39
RPAP3-207ENST00000551293 UBR4Q5T4S7 5183 aa12.6□□□□□ -0.39
RPAP3-207ENST00000551293 SLC25A6P12236 298 aa12.59□□□□□ -0.39
RPAP3-207ENST00000551293 POLR2GP62487 172 aaKnown RBP eCLIP12.59□□□□□ -0.39
RPAP3-207ENST00000551293 LINC00305Q7Z4B0 112 aa12.59□□□□□ -0.39
RPAP3-207ENST00000551293 NFE4Q86UQ8 179 aa12.59□□□□□ -0.39
RPAP3-207ENST00000551293 KLF12Q9Y4X4 402 aa12.59□□□□□ -0.39
RPAP3-207ENST00000551293 LEPP41159 167 aa12.58□□□□□ -0.4
RPAP3-207ENST00000551293 SPCS2Q15005 226 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms