RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 POM121L12Q8N7R1 296 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 LINC00052Q96N35 136 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 KRTAP4-5Q9BYR2 181 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 RBKSQ9H477 322 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 TIMM9Q9Y5J7 89 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 LRP1BQ9NZR2 4599 aa11.82□□□□□ -0.52
SSH1-208ENST00000548522 A0A1W2PS18 150 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 TMEM218A2RU14 115 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 INS-IGF2F8WCM5 200 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 IFNA17P01571 189 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 HOXA1P49639 335 aaPredicted RBP11.81□□□□□ -0.52
SSH1-208ENST00000548522 ATP5IP56385 69 aaPredicted RBP11.81□□□□□ -0.52
SSH1-208ENST00000548522 SERF2P84101 59 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 CLINT1Q14677 625 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 Q6ZRG5 221 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 DTD1Q8TEA8 209 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
SSH1-208ENST00000548522 CARHSP1Q9Y2V2 147 aaKnown RBP11.81□□□□□ -0.52
SSH1-208ENST00000548522 CST7O76096 145 aa11.8□□□□□ -0.52
SSH1-208ENST00000548522 CAMLGP49069 296 aa11.8□□□□□ -0.52
SSH1-208ENST00000548522 VWC2Q2TAL6 325 aa11.8□□□□□ -0.52
SSH1-208ENST00000548522 HSD17B11Q8NBQ5 300 aa11.8□□□□□ -0.52
SSH1-208ENST00000548522 OR2G3Q8NGZ4 309 aa11.8□□□□□ -0.52
SSH1-208ENST00000548522 OR4X1Q8NH49 305 aa11.8□□□□□ -0.52
SSH1-208ENST00000548522 GGACTQ9BVM4 153 aa11.8□□□□□ -0.52
SSH1-208ENST00000548522 XCL2Q9UBD3 114 aa11.8□□□□□ -0.52
SSH1-208ENST00000548522 IGLV2-18A0A075B6J9 118 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 TRAV1-1A0A0B4J248 108 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 HELTA6NFD8 242 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 HBE1P02100 147 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 P0DMU3 169 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 FAM231AP0DMU4 169 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 FAM231CP0DMU5 169 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 ZNF575Q86XF7 245 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 BPIFCQ8NFQ6 507 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 SCGB1C1Q8TD33 95 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 NDUFAF3Q9BU61 184 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 TMEM147Q9BVK8 224 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 SEC11CQ9BY50 192 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 U3KQE9 123 aa11.79□□□□□ -0.52
SSH1-208ENST00000548522 PMS2P5A8MQ11 134 aa11.78□□□□□ -0.52
SSH1-208ENST00000548522 CORTO00230 105 aa11.78□□□□□ -0.52
SSH1-208ENST00000548522 NDUFS6O75380 124 aaKnown RBP11.78□□□□□ -0.52
SSH1-208ENST00000548522 IAPPP10997 89 aa11.78□□□□□ -0.52
SSH1-208ENST00000548522 DEFB1P60022 68 aa11.78□□□□□ -0.52
SSH1-208ENST00000548522 BSXQ3C1V8 233 aa11.78□□□□□ -0.52
SSH1-208ENST00000548522 PBDC1Q9BVG4 233 aa11.78□□□□□ -0.52
SSH1-208ENST00000548522 FNDC10F2Z333 226 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 METTL15P1P0C7V9 234 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 IGLC1P0CG04 106 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 RAB2AP61019 212 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 SLC38A11Q08AI6 406 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 PEA15Q15121 130 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 USF2Q15853 346 aaPredicted RBP11.77□□□□□ -0.53
SSH1-208ENST00000548522 SPANXN5Q5MJ07 72 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 AKR1C8PQ5T2L2 129 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 C16orf54Q6UWD8 224 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 OR10P1Q8NGE3 313 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 WDR61Q9GZS3 305 aaKnown RBP11.77□□□□□ -0.53
SSH1-208ENST00000548522 SH3BGRL3Q9H299 93 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 UQCC1Q9NVA1 299 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 MUC4Q99102 2169 aa11.77□□□□□ -0.53
SSH1-208ENST00000548522 CEBPZOSA8MTT3 80 aa11.76□□□□□ -0.53
SSH1-208ENST00000548522 H3BP45 60 aa11.76□□□□□ -0.53
SSH1-208ENST00000548522 MPDU1O75352 247 aa11.76□□□□□ -0.53
SSH1-208ENST00000548522 RND2P52198 227 aa11.76□□□□□ -0.53
SSH1-208ENST00000548522 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.53
SSH1-208ENST00000548522 EMP1P54849 157 aa11.76□□□□□ -0.53
SSH1-208ENST00000548522 SVBPQ8N300 66 aa11.76□□□□□ -0.53
SSH1-208ENST00000548522 NARS2Q96I59 477 aaKnown RBP11.76□□□□□ -0.53
SSH1-208ENST00000548522 H3BMM0 161 aa11.75□□□□□ -0.53
SSH1-208ENST00000548522 NXPH3O95157 252 aa11.75□□□□□ -0.53
SSH1-208ENST00000548522 MBP02144 154 aa11.75□□□□□ -0.53
SSH1-208ENST00000548522 FXYD7P58549 80 aa11.75□□□□□ -0.53
SSH1-208ENST00000548522 ARL16Q0P5N6 197 aa11.75□□□□□ -0.53
SSH1-208ENST00000548522 LGALS9BQ3B8N2 356 aa11.75□□□□□ -0.53
SSH1-208ENST00000548522 GDF5OSQ5U4N7 250 aa11.75□□□□□ -0.53
SSH1-208ENST00000548522 TMEM182Q6ZP80 229 aaPredicted RBP11.75□□□□□ -0.53
SSH1-208ENST00000548522 ENY2Q9NPA8 101 aa11.75□□□□□ -0.53
SSH1-208ENST00000548522 APOBP04114 4563 aaKnown RBP11.74□□□□□ -0.53
SSH1-208ENST00000548522 IGKV3-20P01619 116 aa11.74□□□□□ -0.53
SSH1-208ENST00000548522 ZNF705AQ6ZN79 300 aaPredicted RBP11.74□□□□□ -0.53
SSH1-208ENST00000548522 Q6ZR54 194 aa11.74□□□□□ -0.53
SSH1-208ENST00000548522 FAM213BQ8TBF2 198 aa11.74□□□□□ -0.53
SSH1-208ENST00000548522 TMEM170AQ8WVE7 144 aa11.74□□□□□ -0.53
SSH1-208ENST00000548522 MBD3L1Q8WWY6 194 aa11.74□□□□□ -0.53
SSH1-208ENST00000548522 IGHV3OR16-12A0A075B7B8 117 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 ZNF705FA8MVS1 300 aaPredicted RBP11.73□□□□□ -0.53
SSH1-208ENST00000548522 IFNA10P01566 189 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 IL4P05112 153 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 H2AFB1P0C5Y9 115 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 ZNF705DP0CH99 300 aaPredicted RBP11.73□□□□□ -0.53
SSH1-208ENST00000548522 ZNF705BP0CI00 300 aaPredicted RBP11.73□□□□□ -0.53
SSH1-208ENST00000548522 OR10J1P30954 320 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 RAB11AP62491 216 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 DLK1P80370 383 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 UBE2DNLQ8IWF7 75 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 C1QTNF4Q9BXJ3 329 aa11.73□□□□□ -0.53
SSH1-208ENST00000548522 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms