RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 LINC01548A6NM66 108 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 OR2J3O76001 311 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 AMY1AP04745 511 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 IL4P05112 153 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 HIST1H1EP10412 219 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 S100A2P29034 98 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 DEFB112Q30KQ8 113 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 IBA57Q5T440 356 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 RNF125Q96EQ8 232 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 GPR61Q9BZJ8 451 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 Q9H3A6 140 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 FBN3Q75N90 2809 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 DNAJC9-AS1A6NH13 148 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 F8W735 103 aaPredicted RBP12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 H3BRN7 92 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 UBE2G1P62253 170 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 PDZD11Q5EBL8 140 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 C5orf17Q8NAS9 161 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 ZNF586Q9NXT0 402 aa12.88□□□□□ -0.35
CHMP1A-204ENST00000547687 A6NDX4 124 aa12.87□□□□□ -0.35
CHMP1A-204ENST00000547687 FBXL7Q9UJT9 491 aa12.87□□□□□ -0.35
CHMP1A-204ENST00000547687 RPH3ALQ9UNE2 315 aa12.87□□□□□ -0.35
CHMP1A-204ENST00000547687 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
CHMP1A-204ENST00000547687 NBEAL1Q6ZS30 2694 aa12.87□□□□□ -0.35
CHMP1A-204ENST00000547687 XKRY2A2RUG3 117 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 IGHV3-23P01764 117 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 UNQ5815/PRO19632Q6UWF5 114 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 BPIFA4PQ86YQ2 179 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 OR8I2Q8N0Y5 310 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 ATG101Q9BSB4 218 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 OTORQ9NRC9 128 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 SERTAD4Q9NUC0 356 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 FCGR2BP31994 310 aaPredicted RBP12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 S100A7AQ86SG5 101 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 FAM110DQ8TAY7 271 aaPredicted RBP12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 RNF24Q9Y225 148 aa12.86□□□□□ -0.35
CHMP1A-204ENST00000547687 ECSCRQ19T08 205 aa12.85□□□□□ -0.35
CHMP1A-204ENST00000547687 TMEM183AQ8IXX5 376 aa12.85□□□□□ -0.35
CHMP1A-204ENST00000547687 JMJD8Q96S16 334 aa12.85□□□□□ -0.35
CHMP1A-204ENST00000547687 TRRAPQ9Y4A5 3859 aa12.85□□□□□ -0.35
CHMP1A-204ENST00000547687 ZNF705GA8MUZ8 300 aaPredicted RBP12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 TCRAP04437 139 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 USF2Q15853 346 aaPredicted RBP12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 COA6Q5JTJ3 125 aaKnown RBP12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 SGK494Q96LW2 274 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 TXN2Q99757 166 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 OR2T8A6NH00 312 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 SCGB2A1O75556 95 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 OR10D4PQ8NGN7 298 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 SVIPQ8NHG7 77 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 VN1R17PQ8TDU5 208 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 FMC1Q96HJ9 113 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 GPR82Q96P67 336 aa12.84□□□□□ -0.35
CHMP1A-204ENST00000547687 TRBV19A0A075B6N1 114 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 SMIM27A0A1W2PRY6 76 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 G3V318 75 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 HOXA3O43365 443 aaPredicted RBP12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 RPL19P84098 196 aaKnown RBP12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 C9orf152Q5JTZ5 239 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 C9orf139Q6ZV77 190 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 EXOC3-AS1Q8N2X6 119 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 SMIM12Q96EX1 92 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 CTSGP08311 255 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 IGLC2P0DOY2 106 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 FABP4P15090 132 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 CBLN1P23435 193 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 IER3P46695 156 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 KLK9Q2XQG4 91 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 NUDT10Q8NFP7 164 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 CMTM2Q8TAZ6 248 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 NUDT11Q96G61 164 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 NIT2Q9NQR4 276 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 KLK9Q9UKQ9 250 aa12.83□□□□□ -0.36
CHMP1A-204ENST00000547687 PKD1L1Q8TDX9 2849 aa12.82□□□□□ -0.36
CHMP1A-204ENST00000547687 ADMP35318 185 aa12.82□□□□□ -0.36
CHMP1A-204ENST00000547687 TCL1AP56279 114 aa12.82□□□□□ -0.36
CHMP1A-204ENST00000547687 BLCAPP62952 87 aa12.82□□□□□ -0.36
CHMP1A-204ENST00000547687 PRR27Q6MZM9 219 aa12.82□□□□□ -0.36
CHMP1A-204ENST00000547687 C17orf77Q96MU5 243 aa12.82□□□□□ -0.36
CHMP1A-204ENST00000547687 LINC00527Q9UJ94 153 aa12.82□□□□□ -0.36
CHMP1A-204ENST00000547687 MRPS12O15235 138 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 C12orf54Q6X4T0 127 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 HIST1H2BLQ99880 126 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 CHRDL1Q9BU40 450 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 MRPL18Q9H0U6 180 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 M0QZK8 103 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 HAX1O00165 279 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 SPINK4O60575 86 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 LTAP01374 205 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 FRMD6-AS1P0C7T7 363 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 RHOGP84095 191 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 C15orf32Q32M92 178 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 LYPD1Q8N2G4 141 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms