RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 NOXA1Q86UR1 476 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 LGI3Q8N145 548 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 CCDC71LQ8N9Z2 235 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 OR4D10Q8NGI6 311 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 MCFD2Q8NI22 146 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 DEFB104AQ8WTQ1 72 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 SLC35E1Q96K37 410 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 TRGV9Q99603 122 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 U3KQ87 197 aa6.34□□□□□ -1.39
CHD4-212ENST00000545083 TEX13DA0A0J9YY54 714 aaPredicted RBP6.33□□□□□ -1.4
CHD4-212ENST00000545083 H7BYZ3 331 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 APOA1P02647 267 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
CHD4-212ENST00000545083 CD3DP04234 171 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 GATA2P23769 480 aaPredicted RBP6.33□□□□□ -1.4
CHD4-212ENST00000545083 GPX4P36969 197 aaPredicted RBP6.33□□□□□ -1.4
CHD4-212ENST00000545083 CDKN1BP46527 198 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 RNASE10Q5GAN6 216 aaKnown RBP6.33□□□□□ -1.4
CHD4-212ENST00000545083 TMEM268Q5VZI3 342 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 TMEM182Q6ZP80 229 aaPredicted RBP6.33□□□□□ -1.4
CHD4-212ENST00000545083 THAP8Q8NA92 274 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 OR4D5Q8NGN0 318 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 OR1B1Q8NGR6 318 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 ZFAND1Q8TCF1 268 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 MARCH1Q8TCQ1 289 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 IL22RA2Q969J5 263 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 RTBDNQ9BSG5 229 aaPredicted RBP6.33□□□□□ -1.4
CHD4-212ENST00000545083 PARD6GQ9BYG4 376 aaPredicted RBP6.33□□□□□ -1.4
CHD4-212ENST00000545083 RBKSQ9H477 322 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 MSRB1Q9NZV6 116 aa6.33□□□□□ -1.4
CHD4-212ENST00000545083 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 LRCOL1A6NCL2 159 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 GABARAPH6UMI1 98 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 ATP6V1G1O75348 118 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 B3GALNT1O75752 331 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 UPK1BO75841 260 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 FABP1P07148 127 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 ORM2P19652 201 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 CXCL3P19876 107 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 SPANXN2Q5MJ10 180 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 DTD1Q8TEA8 209 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 NAA60Q9H7X0 242 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 PPP1R14DQ9NXH3 145 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 PRR13Q9NZ81 148 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 HSPB7Q9UBY9 170 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 SLC45A2Q9UMX9 530 aa6.32□□□□□ -1.4
CHD4-212ENST00000545083 LRP2P98164 4655 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 SNURFLB1AK76 121 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 NPIPB6E9PJ23 425 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 SULT1A3P0DMM9 295 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 SULT1A4P0DMN0 295 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 SCGB2B2Q4G0G5 96 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 GFI1BQ5VTD9 330 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 LYPD5Q6UWN5 251 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 CCDC28AQ8IWP9 274 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 TERB2Q8NHR7 220 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 GPR82Q96P67 336 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 CCDC32Q9BV29 185 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 SLIRPQ9GZT3 109 aaKnown RBP6.31□□□□□ -1.4
CHD4-212ENST00000545083 COMMD3Q9UBI1 195 aa6.31□□□□□ -1.4
CHD4-212ENST00000545083 H3BRN7 92 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
CHD4-212ENST00000545083 S100A1P23297 94 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 KRTAP10-4P60372 401 aaPredicted RBP6.3□□□□□ -1.4
CHD4-212ENST00000545083 VBP1P61758 197 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 DAZ2Q13117 558 aaKnown RBP6.3□□□□□ -1.4
CHD4-212ENST00000545083 PSG3Q16557 428 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 GGNBP1Q5YKI7 109 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 AKAP14Q86UN6 197 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 WFDC10BQ8IUB3 73 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 OR52I2Q8NH67 350 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 NTN5Q8WTR8 489 aaPredicted RBP6.3□□□□□ -1.4
CHD4-212ENST00000545083 RPUSD4Q96CM3 377 aaKnown RBP6.3□□□□□ -1.4
CHD4-212ENST00000545083 C20orf144Q9BQM9 153 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 TMEM147Q9BVK8 224 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 ICOSQ9Y6W8 199 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 LY96Q9Y6Y9 160 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 TMEM56-RWDD3S4R434 201 aa6.3□□□□□ -1.4
CHD4-212ENST00000545083 TRGV2A0A075B6R0 118 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 CRYM-AS1A6NIL9 109 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 PAX4O43316 350 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 CFDP00746 253 aaPredicted RBP6.29□□□□□ -1.4
CHD4-212ENST00000545083 NCS1P62166 190 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 LSM3P62310 102 aaKnown RBP6.29□□□□□ -1.4
CHD4-212ENST00000545083 FAAP20Q6NZ36 180 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 Q6ZSA8 131 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 MTFP1Q9UDX5 166 aa6.29□□□□□ -1.4
CHD4-212ENST00000545083 C14orf166Q9Y224 244 aaKnown RBP6.29□□□□□ -1.4
CHD4-212ENST00000545083 A0A087X0K7 114 aa6.28□□□□□ -1.4
CHD4-212ENST00000545083 TRGV1A0A0A0MS02 117 aa6.28□□□□□ -1.4
CHD4-212ENST00000545083 TRAV12-3A0A0B4J271 114 aa6.28□□□□□ -1.4
CHD4-212ENST00000545083 PRAC2D3DTV9 90 aa6.28□□□□□ -1.4
CHD4-212ENST00000545083 PRSS46E5RG02 174 aa6.28□□□□□ -1.4
CHD4-212ENST00000545083 HPGDSO60760 199 aa6.28□□□□□ -1.4
CHD4-212ENST00000545083 ZNF324O75467 553 aaPredicted RBP6.28□□□□□ -1.4
CHD4-212ENST00000545083 OXTP01178 125 aa6.28□□□□□ -1.4
CHD4-212ENST00000545083 IGHV3-53P01767 116 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms