RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TSPAN13O95857 204 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 SSC4DQ8WTU2 575 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 USMG5Q96IX5 58 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 A0A1B0GW64 132 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 LAGE3Q14657 143 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 FNDC4Q9H6D8 234 aaPredicted RBP10.34□□□□□ -0.75
CHD4-211ENST00000544484 PLXND1Q9Y4D7 1925 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 LMO1P25800 156 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 IGFL3Q6UXB1 125 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 OR9G4Q8NGQ1 327 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 IGHV4-39P01824 125 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 BEND2Q8NDZ0 799 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 NDUFAF3Q9BU61 184 aa10.34□□□□□ -0.75
CHD4-211ENST00000544484 CEACAM8P31997 349 aaPredicted RBP10.33□□□□□ -0.76
CHD4-211ENST00000544484 SRSF4Q08170 494 aaKnown RBP10.33□□□□□ -0.76
CHD4-211ENST00000544484 FAM215AQ9Y5M1 114 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 NPC2P61916 151 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 CRPP02741 224 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 LYL1P12980 280 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 DEFB121Q5J5C9 76 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 ZNF562Q6V9R5 426 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 PLXNA4Q9HCM2 1894 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 A0A087WWL8 130 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 NDUFB8O95169 186 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 LINC00477Q96M19 166 aa10.33□□□□□ -0.76
CHD4-211ENST00000544484 A0A087WX48 190 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 MMP23AO75900 390 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 MCRIP2Q9BUT9 160 aaKnown RBP10.32□□□□□ -0.76
CHD4-211ENST00000544484 LOXP28300 417 aaPredicted RBP10.32□□□□□ -0.76
CHD4-211ENST00000544484 C17orf58Q2M2W7 97 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 Q5PR19 223 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 LSM4Q9Y4Z0 139 aaKnown RBP10.32□□□□□ -0.76
CHD4-211ENST00000544484 RBMY1BA6NDE4 496 aaKnown RBP10.32□□□□□ -0.76
CHD4-211ENST00000544484 RBMY1EA6NEQ0 496 aaKnown RBP10.32□□□□□ -0.76
CHD4-211ENST00000544484 FAM223BA6NKX1 122 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 A6NNC1 897 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 RBMY1DP0C7P1 496 aaKnown RBP10.32□□□□□ -0.76
CHD4-211ENST00000544484 RBMY1A1P0DJD3 496 aaKnown RBP10.32□□□□□ -0.76
CHD4-211ENST00000544484 RBMY1CP0DJD4 496 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 UBE2E1P51965 193 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 FAM223AQ8IWN6 122 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 AMN1Q8IY45 258 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 NOTCH2Q04721 2471 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 C5orf30Q96GV9 206 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 FAM90A2PQ658T7 463 aa10.32□□□□□ -0.76
CHD4-211ENST00000544484 DAZ1Q9NQZ3 744 aaKnown RBP10.32□□□□□ -0.76
CHD4-211ENST00000544484 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 SPG11Q96JI7 2443 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 C9JQL5 133 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 GATA4P43694 442 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 DEFB131AP59861 70 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 VOPP1Q96AW1 172 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 SHANK2-AS3Q9BTD1 123 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 TPSG1Q9NRR2 321 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 IGLV3-9A0A075B6K5 115 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 IGKV1-39P01597 117 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 IGKV1D-39P04432 117 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 DIAPH2-AS1Q14236 149 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 NAA38Q9BRA0 125 aaKnown RBP10.31□□□□□ -0.76
CHD4-211ENST00000544484 DPH3P1Q9H4G8 78 aa10.31□□□□□ -0.76
CHD4-211ENST00000544484 PRADC1Q9BSG0 188 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 ITGB1BP1O14713 200 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 WT1P19544 449 aaPredicted RBP10.3□□□□□ -0.76
CHD4-211ENST00000544484 TMEM95Q3KNT9 176 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 Q8TCH9 128 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 PHLDA1Q8WV24 401 aaPredicted RBP10.3□□□□□ -0.76
CHD4-211ENST00000544484 hDV102S1A0JD36 115 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 CFPP27918 469 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 LINC00158P58513 81 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 PAX2Q02962 417 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 Q86TA4 180 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 K7EM74 188 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 PAX9P55771 341 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
CHD4-211ENST00000544484 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
CHD4-211ENST00000544484 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
CHD4-211ENST00000544484 Q96MF0 132 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 NDUFA4L2Q9NRX3 87 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 PLNP26678 52 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 LYPD1Q8N2G4 141 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 CSTL1Q9H114 145 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 IGHV1-69DA0A0B4J2H0 117 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 IGHV1-69P01742 117 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 ZNF134P52741 427 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 PGPEP1Q9NXJ5 209 aa10.3□□□□□ -0.76
CHD4-211ENST00000544484 NDUFS8O00217 210 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 PRSS33Q8NF86 280 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 HOXA3O43365 443 aaPredicted RBP10.29□□□□□ -0.76
CHD4-211ENST00000544484 DEFB130BP0DP73 79 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 DEFB130AP0DP74 79 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 ORAOV1Q8WV07 137 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 C1orf159Q96HA4 380 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 KNCNA6PVL3 124 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 DKK1O94907 266 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 ARMS2P0C7Q2 107 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 KIAA1671Q9BY89 1806 aa10.29□□□□□ -0.76
CHD4-211ENST00000544484 IGLV1-44P01699 117 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms