RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 BPIFA4PQ86YQ2 179 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 WFDC3Q8IUB2 231 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 TMEM61Q8N0U2 210 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 SFT2D1Q8WV19 159 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 FXYD5Q96DB9 178 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 MAP1LC3BQ9GZQ8 125 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 TMEM231Q9H6L2 316 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 TMEM14CQ9P0S9 112 aa7.02□□□□□ -1.29
DDX55-208ENST00000541259 ZNF785A8K8V0 405 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 CXorf1O96002 111 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 IGLC2P0DOY2 106 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 HIST1H1EP10412 219 aaKnown RBP7.01□□□□□ -1.29
DDX55-208ENST00000541259 RPL7P18124 248 aaKnown RBP7.01□□□□□ -1.29
DDX55-208ENST00000541259 BMI1P35226 326 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 GALR1P47211 349 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 TFPI2P48307 235 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 PRR31Q5SQ13 230 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 C9orf66Q5T8R8 295 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 IGFL4Q6B9Z1 124 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 IQCF2Q8IXL9 164 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 STXBP6Q8NFX7 210 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 BLNKQ8WV28 456 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 SAT2Q96F10 170 aaPredicted RBP7.01□□□□□ -1.29
DDX55-208ENST00000541259 GPR82Q96P67 336 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 MS4A6AQ9H2W1 248 aa7.01□□□□□ -1.29
DDX55-208ENST00000541259 A0A087X0K7 114 aa7□□□□□ -1.29
DDX55-208ENST00000541259 HELTA6NFD8 242 aa7□□□□□ -1.29
DDX55-208ENST00000541259 SLC17A3O00476 420 aa7□□□□□ -1.29
DDX55-208ENST00000541259 NDUFB4O95168 129 aa7□□□□□ -1.29
DDX55-208ENST00000541259 NMBP08949 121 aa7□□□□□ -1.29
DDX55-208ENST00000541259 NBEAP1P0C6P0 100 aa7□□□□□ -1.29
DDX55-208ENST00000541259 PRB4P10163 310 aaPredicted RBP7□□□□□ -1.29
DDX55-208ENST00000541259 HLA-DMBP28068 263 aa7□□□□□ -1.29
DDX55-208ENST00000541259 UBE2L3P68036 154 aaKnown RBP7□□□□□ -1.29
DDX55-208ENST00000541259 BLOC1S1P78537 153 aa7□□□□□ -1.29
DDX55-208ENST00000541259 PQLC2Q6ZP29 291 aa7□□□□□ -1.29
DDX55-208ENST00000541259 RBPMS2Q6ZRY4 209 aaKnown RBP7□□□□□ -1.29
DDX55-208ENST00000541259 ZNF767PQ75MW2 155 aa7□□□□□ -1.29
DDX55-208ENST00000541259 FAM24BQ8N5W8 94 aa7□□□□□ -1.29
DDX55-208ENST00000541259 SUN5Q8TC36 379 aa7□□□□□ -1.29
DDX55-208ENST00000541259 MCRIP2Q9BUT9 160 aaKnown RBP7□□□□□ -1.29
DDX55-208ENST00000541259 HRH4Q9H3N8 390 aa7□□□□□ -1.29
DDX55-208ENST00000541259 TRBV19A0A075B6N1 114 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 TRAV8-2A0A0B4J237 113 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 TRAV1-1A0A0B4J248 108 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 TEX46H3BTG2 121 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 SOCS3O14543 225 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 TSPAN4O14817 238 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 INSL3P51460 131 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 UBE2G2P60604 165 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 GUCA2BQ16661 112 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 RNF182Q8N6D2 247 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 LYPD6BQ8NI32 183 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 LRRC20Q8TCA0 184 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 DCANP1Q8TF63 244 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 NRN1Q9NPD7 142 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 RNF24Q9Y225 148 aa6.99□□□□□ -1.29
DDX55-208ENST00000541259 TRAV25A0A0B4J276 109 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 G3V4G9 280 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 K7EQG2 157 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 DNASE2O00115 360 aaPredicted RBP6.98□□□□□ -1.29
DDX55-208ENST00000541259 HBE1P02100 147 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 CD5P06127 495 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 RANP62826 216 aaKnown RBP6.98□□□□□ -1.29
DDX55-208ENST00000541259 EXOC3-AS1Q8N2X6 119 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 C16orf92Q96LL3 132 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 C20orf173Q96LM9 149 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 TMEM167BQ9NRX6 74 aa6.98□□□□□ -1.29
DDX55-208ENST00000541259 ZNF256Q9Y2P7 627 aaPredicted RBP6.98□□□□□ -1.29
DDX55-208ENST00000541259 YTHDF2Q9Y5A9 579 aaKnown RBP6.98□□□□□ -1.29
DDX55-208ENST00000541259 MGAM2Q2M2H8 2515 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 PAGE4O60829 102 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 PSMB3P49720 205 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 DEFB1P60022 68 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 KRTAP10-11P60412 298 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 PAFAH1B2P68402 229 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 GUK1Q16774 197 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 LCN12Q6JVE5 192 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 SPAG8Q99932 426 aaPredicted RBP6.97□□□□□ -1.29
DDX55-208ENST00000541259 Q9H3A6 140 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 ZNF331Q9NQX6 463 aaPredicted RBP6.97□□□□□ -1.29
DDX55-208ENST00000541259 GNG13Q9P2W3 67 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 NOTCH1P46531 2555 aa6.97□□□□□ -1.29
DDX55-208ENST00000541259 PGPA6NDG6 321 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 FAM74A7A6NL05 159 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 ZNF705FA8MVS1 300 aaPredicted RBP6.96□□□□□ -1.3
DDX55-208ENST00000541259 PRAC2D3DTV9 90 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 M0R3E3 92 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 CD7P09564 240 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 ZNF688P0C7X2 276 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 ATP5G3P48201 142 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 MEOX2P50222 304 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 RAB14P61106 215 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 PDE6HQ13956 83 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 ICAM4Q14773 271 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 ZNF124Q15973 351 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 HAGHQ16775 308 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 BEAN1Q3B7T3 259 aa6.96□□□□□ -1.3
DDX55-208ENST00000541259 CLLU1Q5K131 121 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms