RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CFAP46Q8IYW2 2715 aa7.6□□□□□ -1.19
TTC39C-203ENST00000540918 NMUP48645 174 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 SAPCD1Q5SSQ6 148 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 FAM90A2PQ658T7 463 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 Q8N7P7 452 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 RPP21Q9H633 154 aaKnown RBP7.59□□□□□ -1.19
TTC39C-203ENST00000540918 A0A087X0M5 115 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 A0A1B0GX30 115 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 CBY3A6NI87 242 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 SAP30O75446 220 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 NCR2O95944 276 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 SLC25A16P16260 332 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 HOXB4P17483 251 aaPredicted RBP7.59□□□□□ -1.19
TTC39C-203ENST00000540918 HBBP68871 147 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 ST6GALNAC6Q969X2 333 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 MRPL36Q9P0J6 103 aaKnown RBP7.59□□□□□ -1.19
TTC39C-203ENST00000540918 CENPVL3A0A0U1RRI6 287 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 A0A1B0GUT8 65 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 M0QZK8 103 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 TCRAP04437 139 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 BRWD1-AS2P59051 145 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 BCL6BQ8N143 479 aaPredicted RBP7.59□□□□□ -1.19
TTC39C-203ENST00000540918 ZNF502Q8TBZ5 544 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 UBE2E2Q96LR5 201 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 OTORQ9NRC9 128 aa7.59□□□□□ -1.19
TTC39C-203ENST00000540918 CXorf65A6NEN9 183 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 COLCA2A8K830 154 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 H3BVH4 76 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BKO60814 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 LEPROTL1O95214 131 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BJP06899 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BOP23527 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BBP33778 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BDP58876 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BCP62807 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST2H2BEQ16778 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 RRN3P1Q2M238 152 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BHQ93079 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 RAX2Q96IS3 184 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 LINC01587Q99440 93 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 TRGV9Q99603 122 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BNQ99877 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 HIST1H2BMQ99879 126 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 PRORYQ9H606 182 aa7.59□□□□□ -1.2
TTC39C-203ENST00000540918 ZNF256Q9Y2P7 627 aaPredicted RBP7.59□□□□□ -1.2
TTC39C-203ENST00000540918 ADMP35318 185 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 DSCR9P59020 149 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 ATRQ13535 2644 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 IGLC7A0M8Q6 106 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 OR4C46A6NHA9 309 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 GGTLC3B5MD39 225 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 SERF1AO75920 110 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 ACTL10Q5JWF8 245 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 ODF3L1Q8IXM7 274 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 MCRIP2Q9BUT9 160 aaKnown RBP7.58□□□□□ -1.2
TTC39C-203ENST00000540918 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 TBL2Q9Y4P3 447 aaKnown RBP7.58□□□□□ -1.2
TTC39C-203ENST00000540918 TRAV12-3A0A0B4J271 114 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 LINC01548A6NM66 108 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 ITGB1BP1O14713 200 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 RAB9AP51151 201 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 FAM162BQ5T6X4 162 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 FER1L6-AS1Q8NA97 138 aa7.58□□□□□ -1.2
TTC39C-203ENST00000540918 NBEAQ8NFP9 2946 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 FAM181BA6NEQ2 426 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 TMEM183BQ1AE95 376 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 LCN12Q6JVE5 192 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 TMEM183AQ8IXX5 376 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 FABP5P3A8MUU1 101 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 OOSP1A8MZH6 123 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 DEFB1P60022 68 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 LINC00477Q96M19 166 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 F6UB75 175 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 NUDT3O95989 172 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 APOHP02749 345 aaPredicted RBP7.57□□□□□ -1.2
TTC39C-203ENST00000540918 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
TTC39C-203ENST00000540918 SRSF2Q01130 221 aaKnown RBP7.57□□□□□ -1.2
TTC39C-203ENST00000540918 TMEM75Q8N9X5 138 aa7.57□□□□□ -1.2
TTC39C-203ENST00000540918 ATG2AQ2TAZ0 1938 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 MT-ND6P03923 174 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 TAS2R60P59551 318 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 TMEM256Q8N2U0 113 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 FMC1Q96HJ9 113 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 RNF5Q99942 180 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 TUBA4BQ9H853 241 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 DMXL2Q8TDJ6 3036 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 DSCAML1Q8TD84 2053 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 NDUFS8O00217 210 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 CDX1P47902 265 aaPredicted RBP7.56□□□□□ -1.2
TTC39C-203ENST00000540918 VAMP3Q15836 100 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 TMEM249Q2WGJ8 235 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 DYNAPQ8N1N2 210 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 LINC00311Q8N616 119 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 KLHDC1Q8N7A1 406 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 HCFC1P51610 2035 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 IGKV1OR2-108A0A075B7D4 117 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 TRAV1-1A0A0B4J248 108 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 SMKR1H3BMG3 65 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 IGLC1P0CG04 106 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms