RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 IFI27P40305 119 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 ZNF329Q86UD4 541 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 C8orf46Q8TAG6 207 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 DKK2Q9UBU2 259 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 SMG1Q96Q15 3661 aaKnown RBP7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 DUTP33316 252 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 AAED1Q7RTV5 226 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 PPDPFLQ8WWR9 84 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 PTH2Q96A98 100 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 SLC25A33Q9BSK2 321 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 P01737 135 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 FXYD7P58549 80 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 GNG5P63218 68 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 CT83Q5H943 113 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 MORN5Q5VZ52 161 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 PPP1R35Q8TAP8 253 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 PIFOQ8TCI5 191 aa7.58□□□□□ -1.2
CTNNA1-243ENST00000540387 IGKV3D-15A0A087WSY6 115 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 IGHV3-9P01782 118 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 SRSF1Q07955 248 aaKnown RBP eCLIP7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 VKORC1L1Q8N0U8 176 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 OR5AN1Q8NGI8 311 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 AJUBAQ96IF1 538 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 FAM167A-AS1Q96KT0 104 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 USP24Q9UPU5 2620 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 TRAV3A0A0B4J244 114 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 SRRM4A7MD48 611 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 MRPL33O75394 65 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 MPV17P39210 176 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 KLRB1Q12918 225 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 GAGE2BQ13066 116 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 GAGE2EQ4V326 116 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 C5orf47Q569G3 176 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 SLC25A2Q9BXI2 301 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 GFRA4Q9GZZ7 299 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 VCX2Q9H322 139 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 GAGE2DQ9UEU5 116 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 EPG5Q9HCE0 2579 aa7.57□□□□□ -1.2
CTNNA1-243ENST00000540387 COL6A6A6NMZ7 2263 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 ZGRF1Q86YA3 2104 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 IGKV1OR2-108A0A075B7D4 117 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 LOC389332A0A1B0GUA5 103 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 LINC01548A6NM66 108 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 OR2H2O95918 312 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 PYYP10082 97 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 MBNL2Q5VZF2 373 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 FAM159AQ6UWV7 190 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 MAP1LC3AQ9H492 121 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 CSDC2Q9Y534 153 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 FREM1Q5H8C1 2179 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 C19orf71A6NCJ1 209 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 ZNF688P0C7X2 276 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 MOB3BQ86TA1 216 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 C9orf106Q8NAJ2 232 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 OR9G1Q8NH87 305 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 PRR7Q8TB68 274 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 MLST8Q9BVC4 326 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 KALRNO60229 2985 aa7.56□□□□□ -1.2
CTNNA1-243ENST00000540387 C12orf77C9JDV5 145 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 FCGR3BO75015 233 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 IFITM1P13164 125 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 TTC32Q5I0X7 151 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 GFRALQ6UXV0 394 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 SEM1Q6ZVN7 128 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 TEN1Q86WV5 123 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 ITLN1Q8WWA0 313 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 DLX4Q92988 240 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 COQ2Q96H96 371 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 NDUFS7O75251 213 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 MOSP00540 346 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 FOXG1P55316 489 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 DOCK7Q96N67 2140 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 FAM215AQ9Y5M1 114 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 RELNP78509 3460 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 TRGV8A0A0C4DH27 118 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 WI2-2373I1.2A0A1W2PRP0 233 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 TMEM262E9PQX1 116 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 FCN3O75636 299 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 HBDP02042 147 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 FOXF2Q12947 444 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 MEIG1Q5JSS6 88 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 MORN3Q6PF18 240 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 WFDC3Q8IUB2 231 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 FAM57AQ8TBR7 257 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 RND1Q92730 232 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 DAZAP1Q96EP5 407 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 FOXB1Q99853 325 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 RAB9BQ9NP90 201 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 ZNF492Q9P255 531 aa7.55□□□□□ -1.2
CTNNA1-243ENST00000540387 POLEQ07864 2286 aa7.54□□□□□ -1.2
CTNNA1-243ENST00000540387 ZFYVE26Q68DK2 2539 aa7.54□□□□□ -1.2
CTNNA1-243ENST00000540387 OVOL3O00110 214 aa7.54□□□□□ -1.2
CTNNA1-243ENST00000540387 NGFP01138 241 aa7.54□□□□□ -1.2
CTNNA1-243ENST00000540387 IGHG4P01861 327 aa7.54□□□□□ -1.2
CTNNA1-243ENST00000540387 PCBD1P61457 104 aa7.54□□□□□ -1.2
CTNNA1-243ENST00000540387 TAL2Q16559 108 aa7.54□□□□□ -1.2
CTNNA1-243ENST00000540387 CNEP1R1Q8N9A8 125 aa7.54□□□□□ -1.2
CTNNA1-243ENST00000540387 NRGNQ92686 78 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms