RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.23□□□□□ -0.13
TNFRSF1A-213ENST00000540022 MCRIP2Q9BUT9 160 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-213ENST00000540022 TRBV19A0A075B6N1 114 aa14.22□□□□□ -0.13
TNFRSF1A-213ENST00000540022 A0A087X0K7 114 aa14.22□□□□□ -0.13
TNFRSF1A-213ENST00000540022 IZUMO1RA6ND01 250 aa14.22□□□□□ -0.13
TNFRSF1A-213ENST00000540022 CD5P06127 495 aa14.22□□□□□ -0.13
TNFRSF1A-213ENST00000540022 IGLL1P15814 213 aa14.22□□□□□ -0.13
TNFRSF1A-213ENST00000540022 GBGT1Q8N5D6 347 aa14.22□□□□□ -0.13
TNFRSF1A-213ENST00000540022 SUN5Q8TC36 379 aa14.22□□□□□ -0.13
TNFRSF1A-213ENST00000540022 BLNKQ8WV28 456 aa14.22□□□□□ -0.13
TNFRSF1A-213ENST00000540022 TEX46H3BTG2 121 aa14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 SLC17A3O00476 420 aa14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 INSL3P51460 131 aa14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 RAB14P61106 215 aa14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 CLLU1Q5K131 121 aa14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 RBPMS2Q6ZRY4 209 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 MS4A6AQ9H2W1 248 aa14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 NRN1Q9NPD7 142 aa14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 TMEM167BQ9NRX6 74 aa14.21□□□□□ -0.13
TNFRSF1A-213ENST00000540022 TSPAN4O14817 238 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 NDUFB4O95168 129 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 PSMB3P49720 205 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 DEFA6Q01524 100 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 TRAV25A0A0B4J276 109 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 TFPI2P48307 235 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 GUK1Q16774 197 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 WFDC3Q8IUB2 231 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 DCANP1Q8TF63 244 aa14.2□□□□□ -0.14
TNFRSF1A-213ENST00000540022 SOCS3O14543 225 aa14.19□□□□□ -0.14
TNFRSF1A-213ENST00000540022 OR2K2Q8NGT1 345 aa14.19□□□□□ -0.14
TNFRSF1A-213ENST00000540022 DNASE2O00115 360 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-213ENST00000540022 MEOX2P50222 304 aa14.18□□□□□ -0.14
TNFRSF1A-213ENST00000540022 RANP62826 216 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1A-213ENST00000540022 PDE6HQ13956 83 aa14.18□□□□□ -0.14
TNFRSF1A-213ENST00000540022 OXLD1Q5BKU9 147 aa14.18□□□□□ -0.14
TNFRSF1A-213ENST00000540022 ZNF331Q9NQX6 463 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-213ENST00000540022 GNG13Q9P2W3 67 aa14.18□□□□□ -0.14
TNFRSF1A-213ENST00000540022 TRAV8-2A0A0B4J237 113 aa14.17□□□□□ -0.14
TNFRSF1A-213ENST00000540022 K7EQG2 157 aa14.17□□□□□ -0.14
TNFRSF1A-213ENST00000540022 UBE2G2P60604 165 aa14.17□□□□□ -0.14
TNFRSF1A-213ENST00000540022 PAFAH1B2P68402 229 aa14.17□□□□□ -0.14
TNFRSF1A-213ENST00000540022 IGFL4Q6B9Z1 124 aa14.17□□□□□ -0.14
TNFRSF1A-213ENST00000540022 LCN12Q6JVE5 192 aa14.17□□□□□ -0.14
TNFRSF1A-213ENST00000540022 SPAG8Q99932 426 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF1A-213ENST00000540022 YTHDF2Q9Y5A9 579 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-213ENST00000540022 PAGE4O60829 102 aa14.16□□□□□ -0.14
TNFRSF1A-213ENST00000540022 ZNF253O75346 499 aa14.16□□□□□ -0.14
TNFRSF1A-213ENST00000540022 GUCA2BQ16661 112 aa14.16□□□□□ -0.14
TNFRSF1A-213ENST00000540022 FAM24BQ8N5W8 94 aa14.16□□□□□ -0.14
TNFRSF1A-213ENST00000540022 C16orf92Q96LL3 132 aa14.16□□□□□ -0.14
TNFRSF1A-213ENST00000540022 FAM74A7A6NL05 159 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 G3V4G9 280 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 HLA-DMBP28068 263 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 PMS2P11Q13670 270 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 EXOC3-AS1Q8N2X6 119 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 SLC50A1Q9BRV3 221 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 Q9H3A6 140 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 ZNF256Q9Y2P7 627 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 TRAV2A0A0B4J234 112 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 A0A1W2PRE2 83 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 PPT1P50897 306 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 PSG9Q00887 426 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 RNF182Q8N6D2 247 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 MANBALQ9NQG1 85 aa14.15□□□□□ -0.14
TNFRSF1A-213ENST00000540022 DNAH3Q8TD57 4116 aa14.14□□□□□ -0.15
TNFRSF1A-213ENST00000540022 OR4C46A6NHA9 309 aa14.14□□□□□ -0.15
TNFRSF1A-213ENST00000540022 GGTLC3B5MD39 225 aa14.14□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ISLRO14498 428 aa14.14□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ICAM4Q14773 271 aa14.14□□□□□ -0.15
TNFRSF1A-213ENST00000540022 HAGHQ16775 308 aa14.14□□□□□ -0.15
TNFRSF1A-213ENST00000540022 LYPD1Q8N2G4 141 aa14.14□□□□□ -0.15
TNFRSF1A-213ENST00000540022 TGP01266 2768 aa14.14□□□□□ -0.15
TNFRSF1A-213ENST00000540022 PGPA6NDG6 321 aa14.13□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ATP5G3P48201 142 aa14.13□□□□□ -0.15
TNFRSF1A-213ENST00000540022 SUMO1P63165 101 aaKnown RBP14.13□□□□□ -0.15
TNFRSF1A-213ENST00000540022 CST9LP1Q5W188 147 aa14.13□□□□□ -0.15
TNFRSF1A-213ENST00000540022 C20orf173Q96LM9 149 aa14.13□□□□□ -0.15
TNFRSF1A-213ENST00000540022 GPR61Q9BZJ8 451 aa14.13□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ARL2-SNX15V9GYD0 113 aa14.13□□□□□ -0.15
TNFRSF1A-213ENST00000540022 M0R3E3 92 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 IFNA1P01562 189 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ZNF688P0C7X2 276 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 PRB4P10163 310 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 BCL2P10415 239 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 BEAN1Q3B7T3 259 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 SAMD13Q5VXD3 122 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 FAM210AQ96ND0 272 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 RARRES2Q99969 163 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 AAMDCQ9H7C9 122 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 OTORQ9NRC9 128 aa14.12□□□□□ -0.15
TNFRSF1A-213ENST00000540022 LOC102723971A0A1B0GUV8 181 aa14.11□□□□□ -0.15
TNFRSF1A-213ENST00000540022 RBFOX3A6NFN3 312 aa14.11□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ID1P41134 155 aa14.11□□□□□ -0.15
TNFRSF1A-213ENST00000540022 PSG3Q16557 428 aa14.11□□□□□ -0.15
TNFRSF1A-213ENST00000540022 SAMD5Q5TGI4 173 aa14.11□□□□□ -0.15
TNFRSF1A-213ENST00000540022 LINC00052Q96N35 136 aa14.11□□□□□ -0.15
TNFRSF1A-213ENST00000540022 ZNF705FA8MVS1 300 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-213ENST00000540022 TOR2AQ5JU69 321 aa14.1□□□□□ -0.15
TNFRSF1A-213ENST00000540022 CCDC28AQ8IWP9 274 aa14.1□□□□□ -0.15
TNFRSF1A-213ENST00000540022 C11orf94C9JXX5 98 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms