RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 C21orf62-AS1Q17RA5 79 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 ZNF491Q8N8L2 437 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 RPEQ96AT9 228 aa7.63□□□□□ -1.19
CDH13-204ENST00000539548 H0Y8G0 127 aa7.62□□□□□ -1.19
CDH13-204ENST00000539548 CNIH1O95406 144 aa7.62□□□□□ -1.19
CDH13-204ENST00000539548 U3KQK5 164 aa7.62□□□□□ -1.19
CDH13-204ENST00000539548 ZGRF1Q86YA3 2104 aa7.62□□□□□ -1.19
CDH13-204ENST00000539548 ZFHX4Q86UP3 3567 aa7.62□□□□□ -1.19
CDH13-204ENST00000539548 A0A087X0K7 114 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 OR2T8A6NH00 312 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 APOBEC3AP31941 199 aaPredicted RBP7.61□□□□□ -1.19
CDH13-204ENST00000539548 PRB3Q04118 309 aaPredicted RBP7.61□□□□□ -1.19
CDH13-204ENST00000539548 PLGLAQ15195 96 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 RNF125Q96EQ8 232 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 SPENQ96T58 3664 aaKnown RBP7.61□□□□□ -1.19
CDH13-204ENST00000539548 PPIAL4CA0A0B4J2A2 164 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 CBY3A6NI87 242 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 B9A039 149 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 NCR2O95944 276 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 PPIAL4GP0DN37 164 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 COX7A1P24310 79 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 FCGR2BP31994 310 aaPredicted RBP7.61□□□□□ -1.19
CDH13-204ENST00000539548 PDE6HQ13956 83 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 C2orf91Q6ZV80 131 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 S100A7AQ86SG5 101 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 ASCL2Q99929 193 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 TIMM8BQ9Y5J9 83 aaPredicted RBP7.61□□□□□ -1.19
CDH13-204ENST00000539548 ROS1P08922 2347 aa7.61□□□□□ -1.19
CDH13-204ENST00000539548 A0A096LNJ9 63 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 SERTM2A0A1B0GWG4 89 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 IL4P05112 153 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 CT45A10P0DMU9 189 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 IFI27P40305 119 aaPredicted RBP7.6□□□□□ -1.19
CDH13-204ENST00000539548 SAPCD1Q5SSQ6 148 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 FAM104BQ5XKR9 115 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 LYZL1Q6UWQ5 148 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 ERASQ7Z444 233 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 COX8CQ7Z4L0 72 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 OR1N2Q8NGR9 330 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 C8orf49Q96NF6 230 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 RAB1BQ9H0U4 201 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 CHD6Q8TD26 2715 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 ABCA1O95477 2261 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 MAP1BP46821 2468 aaKnown RBP7.6□□□□□ -1.19
CDH13-204ENST00000539548 TMEM189A5PLL7 270 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 M0R3E3 92 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 FAM106CPP0CH98 169 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 SEC11AP67812 179 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 PSG9Q00887 426 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 FAM106AQ4KMX7 169 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 TMEM97Q5BJF2 176 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 ARL6IP6Q8N6S5 226 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 AAMDCQ9H7C9 122 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 SIGLEC8Q9NYZ4 499 aa7.6□□□□□ -1.19
CDH13-204ENST00000539548 D6R8Y8 96 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 TIMM23O14925 209 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 FGF6P10767 208 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 LGALS9BQ3B8N2 356 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 ANKRD39Q53RE8 183 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 LGALS9CQ6DKI2 356 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 GFRALQ6UXV0 394 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 PIP4P2Q8N4L2 257 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 ZNF48Q96MX3 618 aaPredicted RBP7.59□□□□□ -1.19
CDH13-204ENST00000539548 PRELID3AQ96N28 172 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 TPPP3Q9BW30 176 aa7.59□□□□□ -1.19
CDH13-204ENST00000539548 PEF1Q9UBV8 284 aaKnown RBP7.59□□□□□ -1.19
CDH13-204ENST00000539548 LYNX1G3V0Z9 82 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 NBR2O15453 112 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 KLK10O43240 276 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 SH2D1AO60880 128 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 LYNX1P0DP58 116 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 FOXE3Q13461 319 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 ORMDL3Q8N138 153 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 NPBQ8NG41 125 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 CST9LQ9H4G1 147 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 SH3BGRL2Q9UJC5 107 aa7.59□□□□□ -1.2
CDH13-204ENST00000539548 RP1L1Q8IWN7 2480 aaPredicted RBP7.58□□□□□ -1.2
CDH13-204ENST00000539548 TMEM213A2RRL7 107 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 FBLL1A6NHQ2 334 aaKnown RBP7.58□□□□□ -1.2
CDH13-204ENST00000539548 GNG7O60262 68 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 NDUFA3O95167 84 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 PPBPP02775 128 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 MFAP4P55083 255 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 LOXL1Q08397 574 aaPredicted RBP7.58□□□□□ -1.2
CDH13-204ENST00000539548 LDLRAD2Q5SZI1 272 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 LY6G5BQ8NDX9 201 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 OR8A1Q8NGG7 326 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 CEP295Q9C0D2 2601 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 PKDREJQ9NTG1 2253 aa7.58□□□□□ -1.2
CDH13-204ENST00000539548 TRAV8-6A0A0B4J262 113 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 C7orf71A4D174 169 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 CD3EP07766 207 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 PAX8Q06710 450 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 MRPL51Q4U2R6 128 aaKnown RBP7.57□□□□□ -1.2
CDH13-204ENST00000539548 OCIAD2Q56VL3 154 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 AMN1Q8IY45 258 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
CDH13-204ENST00000539548 BCL6BQ8N143 479 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms