RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 HIST1H2BDP58876 126 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 PSME3P61289 254 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 HIST1H2BCP62807 126 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 SUPT4H1P63272 117 aaKnown RBP2.04□□□□□ -2.08
TRAV11-201ENST00000539512 ZNF345Q14585 488 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 CDK10Q15131 360 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 HIST2H2BEQ16778 126 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 GREB1Q4ZG55 1949 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.04□□□□□ -2.08
TRAV11-201ENST00000539512 AADACL3Q5VUY0 350 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 RPL22L1Q6P5R6 122 aaKnown RBP2.04□□□□□ -2.08
TRAV11-201ENST00000539512 Q6ZS49 121 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 ASCC3Q8N3C0 2202 aaKnown RBP2.04□□□□□ -2.08
TRAV11-201ENST00000539512 HIST1H2BHQ93079 126 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 SLC35B4Q969S0 331 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 HIST1H2BNQ99877 126 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 HIST1H2BMQ99879 126 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 CISHQ9NSE2 258 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 BSNQ9UPA5 3926 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 SCN10AQ9Y5Y9 1956 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 DCHS2Q6V1P9 2916 aa2.04□□□□□ -2.08
TRAV11-201ENST00000539512 ACANP16112 2415 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 SIPA1L1O43166 1804 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 TSC2P49815 1807 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 CCDC171Q6TFL3 1326 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 TMEM114B3SHH9 223 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 RPP14O95059 124 aaKnown RBP2.03□□□□□ -2.08
TRAV11-201ENST00000539512 HIST1H1EP10412 219 aaKnown RBP2.03□□□□□ -2.08
TRAV11-201ENST00000539512 S100A5P33763 92 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 SULT1A1P50225 295 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 AP3S2P59780 193 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 SURF2Q15527 256 aaPredicted RBP2.03□□□□□ -2.08
TRAV11-201ENST00000539512 SYPL2Q5VXT5 272 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 C20orf196Q8IYI0 205 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 OR2T4Q8NH00 348 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 GINS4Q9BRT9 223 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 IL20Q9NYY1 176 aa2.03□□□□□ -2.08
TRAV11-201ENST00000539512 EPPK1P58107 5090 aaKnown RBP2.03□□□□□ -2.08
TRAV11-201ENST00000539512 MAP1AP78559 2803 aaPredicted RBP2.03□□□□□ -2.09
TRAV11-201ENST00000539512 CHD5Q8TDI0 1954 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 FUOMA2VDF0 154 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 IFNA6P05013 189 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 HBA1P69905 142 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 REEP5Q00765 189 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 RUNX1Q01196 453 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 AESQ08117 197 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 TRAPPC5Q8IUR0 188 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 C9orf163Q8N9P6 203 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 MRPL30Q8TCC3 161 aaKnown RBP2.02□□□□□ -2.09
TRAV11-201ENST00000539512 RASSF5Q8WWW0 418 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 PRTFDC1Q9NRG1 225 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 NYNRINQ9P2P1 1898 aaKnown RBP2.02□□□□□ -2.09
TRAV11-201ENST00000539512 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 LAMA4Q16363 1823 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 MXRA5Q9NR99 2828 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 MED13LQ71F56 2210 aa2.02□□□□□ -2.09
TRAV11-201ENST00000539512 CR1P17927 2039 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 MCM3APO60318 1980 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 F5P12259 2224 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 GOLGA4Q13439 2230 aaKnown RBP2.01□□□□□ -2.09
TRAV11-201ENST00000539512 UBR4Q5T4S7 5183 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 CTXN2P0C2S0 81 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 ZNF80P51504 273 aaPredicted RBP2.01□□□□□ -2.09
TRAV11-201ENST00000539512 ARPP19P56211 112 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 LSM6P62312 80 aaKnown RBP2.01□□□□□ -2.09
TRAV11-201ENST00000539512 SPANXN3Q5MJ09 141 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 KRT222Q8N1A0 295 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 KLK6Q92876 244 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 SCGB3A1Q96QR1 104 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 DERL1Q9BUN8 251 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 LHFPL6Q9Y693 200 aa2.01□□□□□ -2.09
TRAV11-201ENST00000539512 NSD1Q96L73 2696 aaPredicted RBP2□□□□□ -2.09
TRAV11-201ENST00000539512 TRAV14DV4A0A0A6YYC5 116 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 TGIF2-C20orf24A0A0A6YYL0 155 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 TMEM212A6NML5 194 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 TNFSF15O95150 251 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 HLA-DRB1P01911 266 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 TCRBP04435 133 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 IFNA16P05015 189 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 COX6B1P14854 86 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 PPP1R2P41236 205 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 OR2F1Q13607 317 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 PPP1R2P3Q6NXS1 205 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 LPCAT3Q6P1A2 487 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 BPIFA4PQ86YQ2 179 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 LRRC25Q8N386 305 aaPredicted RBP2□□□□□ -2.09
TRAV11-201ENST00000539512 DGCR14Q96DF8 476 aaKnown RBP2□□□□□ -2.09
TRAV11-201ENST00000539512 DCUN1D1Q96GG9 259 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 RETNLBQ9BQ08 111 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 CMTM6Q9NX76 183 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 OR5AC2Q9NZP5 309 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 CKLFQ9UBR5 152 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 SLC22A13Q9Y226 551 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 SNURFQ9Y675 71 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 VPS13CQ709C8 3753 aa2□□□□□ -2.09
TRAV11-201ENST00000539512 MYH2Q9UKX2 1941 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 HYDINQ4G0P3 5121 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 OR5F1O95221 314 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 HSD11B1P28845 292 aa1.99□□□□□ -2.09
TRAV11-201ENST00000539512 MRPS25P82663 173 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms