RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 OR13C6PQ8NH95 151 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 TMEM126AQ9H061 195 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 SSR3Q9UNL2 185 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 CDK12Q9NYV4 1490 aaPredicted RBP1.74□□□□□ -2.13
PRKDC-208ENST00000536710 NRAPQ86VF7 1730 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 NWD2Q9ULI1 1742 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 SDK1Q7Z5N4 2213 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 RRBP1Q9P2E9 1410 aaKnown RBP1.74□□□□□ -2.13
PRKDC-208ENST00000536710 ALS2Q96Q42 1657 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 FREM1Q5H8C1 2179 aa1.74□□□□□ -2.13
PRKDC-208ENST00000536710 ADGRB2O60241 1585 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 H7C1C5 153 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 GGCTO75223 188 aaKnown RBP1.73□□□□□ -2.13
PRKDC-208ENST00000536710 NEFHP12036 1026 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PHBP35232 272 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PPP1R2P41236 205 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 LCN6P62502 163 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 MYL5Q02045 173 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PLCXD2Q0VAA5 305 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 SNCBQ16143 134 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PPP1R2P3Q6NXS1 205 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PAIP2Q9BPZ3 127 aaKnown RBP1.73□□□□□ -2.13
PRKDC-208ENST00000536710 SLC25A21Q9BQT8 299 aaPredicted RBP1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PBDC1Q9BVG4 233 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 RASL12Q9NYN1 266 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 SS18L2Q9UHA2 77 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PCTPQ9UKL6 214 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 ARHGEF28Q8N1W1 1705 aaKnown RBP1.73□□□□□ -2.13
PRKDC-208ENST00000536710 TNS1Q9HBL0 1735 aaKnown RBP1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PXDNQ92626 1479 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 NRXN1Q9ULB1 1477 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 TRIOBPQ9H2D6 2365 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 KIF1AQ12756 1690 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 TOPAZ1Q8N9V7 1692 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 HFM1A2PYH4 1435 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 TECPR2O15040 1411 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 NAIPQ13075 1403 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 PHRF1Q9P1Y6 1649 aaKnown RBP1.73□□□□□ -2.13
PRKDC-208ENST00000536710 WNK3Q9BYP7 1800 aa1.73□□□□□ -2.13
PRKDC-208ENST00000536710 RREB1Q92766 1687 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 MYOM2P54296 1465 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 DUXBA0A1W2PPF3 345 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 CCDC160A6NGH7 325 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 TMEM256-PLSCR3K7ERE1 68 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 NFYBP25208 207 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 POU6F1Q14863 301 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 TEX261Q6UWH6 196 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 EXOC3-AS1Q8N2X6 119 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 CANT1Q8WVQ1 401 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 LYRM2Q9NU23 88 aaPredicted RBP1.72□□□□□ -2.13
PRKDC-208ENST00000536710 U3KQ87 197 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 LRP5O75197 1615 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 RGPD3A6NKT7 1758 aaPredicted RBP1.72□□□□□ -2.13
PRKDC-208ENST00000536710 RGPD4Q7Z3J3 1758 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 ADGRB1O14514 1584 aa1.72□□□□□ -2.13
PRKDC-208ENST00000536710 ITSN1Q15811 1721 aa1.71□□□□□ -2.13
PRKDC-208ENST00000536710 ZNF106Q9H2Y7 1883 aaKnown RBP1.71□□□□□ -2.14
PRKDC-208ENST00000536710 USP54Q70EL1 1684 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 LMO7Q8WWI1 1683 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 SBF2Q86WG5 1849 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 C1orf167Q5SNV9 1468 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 BRWD1Q9NSI6 2320 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 TRBV6-7A0A0A0MS04 114 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 M0R378 163 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 SCGB2B2Q4G0G5 96 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 C1orf137Q5JT78 98 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 EIF5AL1Q6IS14 154 aaKnown RBP1.71□□□□□ -2.14
PRKDC-208ENST00000536710 IFT20Q8IY31 132 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 Q8IYB0 196 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 ZNF418Q8TF45 676 aaPredicted RBP1.71□□□□□ -2.14
PRKDC-208ENST00000536710 LINC00467Q9BRT7 94 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 GINS3Q9BRX5 216 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 NPCDR1Q9BY65 106 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 GID8Q9NWU2 228 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 NRKQ7Z2Y5 1582 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 RGPD1P0DJD0 1748 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 PEAK1Q9H792 1746 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 DLC1Q96QB1 1528 aa1.71□□□□□ -2.14
PRKDC-208ENST00000536710 GOLGB1Q14789 3259 aaKnown RBP1.71□□□□□ -2.14
PRKDC-208ENST00000536710 UTRNP46939 3433 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 BCL9LQ86UU0 1499 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 COL14A1Q05707 1796 aaKnown RBP1.7□□□□□ -2.14
PRKDC-208ENST00000536710 RIIAD1A6NNX1 92 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 A8MWV9 139 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 G0S2P27469 103 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 TAS2R41P59536 307 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 COL24A1Q17RW2 1714 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 NUP188Q5SRE5 1749 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 OR2J1Q9GZK6 312 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 PARP4Q9UKK3 1724 aaKnown RBP1.7□□□□□ -2.14
PRKDC-208ENST00000536710 AKAP12Q02952 1782 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 RGPD5Q99666 1765 aa1.7□□□□□ -2.14
PRKDC-208ENST00000536710 APOA2P02652 100 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 DYNLT3P51808 116 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 CNBPP62633 177 aaKnown RBP1.69□□□□□ -2.14
PRKDC-208ENST00000536710 GNG3P63215 75 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 SMIM20Q8N5G0 67 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 OR10K1Q8NGX5 313 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 C4orf3Q8WVX3 66 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms