RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CST7O76096 145 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 DPM2O94777 84 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 LYPD3O95274 346 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 NDUFC2O95298 119 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 IGLV3-25P01717 112 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TRACP01848 142 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 IGHMP01871 453 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 RBP4P02753 201 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 ASAH2BP0C7U1 165 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 CXCL8P10145 99 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 RPL35AP18077 110 aaKnown RBP1.92□□□□□ -2.1
SKA3-207ENST00000536239 COX5AP20674 150 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 NPPCP23582 126 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 HLA-DMBP28068 263 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 CSN1S1P47710 185 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 CCL23P55773 120 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 CLDN17P56750 224 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 HERV-K104P61576 105 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 PPP1CAP62136 330 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 RPS18P62269 152 aaKnown RBP1.92□□□□□ -2.1
SKA3-207ENST00000536239 RPL30P62888 115 aaKnown RBP1.92□□□□□ -2.1
SKA3-207ENST00000536239 SLC38A11Q08AI6 406 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 C1orf61Q13536 156 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 FAM53BQ14153 422 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 RTL8BQ17RB0 113 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 RRN3P1Q2M238 152 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 C12orf74Q32Q52 190 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 LGALS9BQ3B8N2 356 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 LINC01590Q5TEZ4 76 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 C1orf195Q5TG92 126 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 Q5XG85 94 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 LGALS9CQ6DKI2 356 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 GAGE2AQ6NT46 116 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 CDC42EP5Q6NZY7 148 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 HRCT1Q6UXD1 115 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 Q6ZT83 130 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 C6orf201Q7Z4U5 140 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 ATP5L2Q7Z4Y8 100 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 RPP25LQ8N5L8 163 aaKnown RBP1.92□□□□□ -2.1
SKA3-207ENST00000536239 ZNF525Q8N782 197 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 MYOZ3Q8TDC0 251 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.92□□□□□ -2.1
SKA3-207ENST00000536239 IL1F10Q8WWZ1 152 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 FGF14Q92915 247 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 C11orf52Q96A22 123 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 ELSPBP1Q96BH3 223 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 DPH3Q96FX2 82 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TIMD4Q96H15 378 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 LINC00477Q96M19 166 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 LINC01600Q96MT4 127 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 GPX7Q96SL4 187 aaPredicted RBP1.92□□□□□ -2.1
SKA3-207ENST00000536239 TMEM147Q9BVK8 224 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TTTY10Q9BZA0 68 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TMEM222Q9H0R3 208 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 GLIPR2Q9H4G4 154 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 JPT2Q9H910 190 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TAS2R4Q9NYW5 299 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 SELENOKQ9Y6D0 94 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 ARHGAP21Q5T5U3 1957 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 PCDH15Q96QU1 1955 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 PTPRSQ13332 1948 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 TRAV27A0A087WT01 109 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 TMED7-TICAM2A0A0A6YYA0 188 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 FAM240AA0A1B0GVK7 77 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 A0A1W2PPR1 153 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 TCRBV4S1A1TA0A5B7 111 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 C17orf51A8MQB3 221 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 A8MWL6 223 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 NDUFC2-KCTD14E9PQ53 114 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 H0YIG0 161 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 OVOL1O14753 267 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 RENP00797 406 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 PPYP01298 95 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 IL4P05112 153 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 LGALS1P09382 135 aaKnown RBP1.91□□□□□ -2.1
SKA3-207ENST00000536239 PIRTP0C851 137 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 COX7CP15954 63 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 BCL3P20749 454 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 PSMB8P28062 276 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 FXYD2P54710 66 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 DSCR4P56555 118 aaPredicted RBP1.91□□□□□ -2.1
SKA3-207ENST00000536239 TMEM50BP56557 158 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 PLGLB1Q02325 96 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 PRDX1Q06830 199 aaKnown RBP1.91□□□□□ -2.1
SKA3-207ENST00000536239 VGLL4Q14135 290 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 SP6Q3SY56 376 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 SLC48A1Q6P1K1 146 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 TMEM14EPQ6UXP3 125 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 Q71RC1 249 aaPredicted RBP1.91□□□□□ -2.1
SKA3-207ENST00000536239 ANKRD29Q8N6D5 301 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 C15orf53Q8NAA6 179 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 SAP25Q8TEE9 199 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 TMEM158Q8WZ71 300 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 C9orf85Q96MD7 179 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 ZNF488Q96MN9 340 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 LINC00167Q96N53 147 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 SLC25A2Q9BXI2 301 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
SKA3-207ENST00000536239 RNASE7Q9H1E1 156 aaKnown RBP1.91□□□□□ -2.1
SKA3-207ENST00000536239 VSIRQ9H7M9 311 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms