RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 PGPEP1Q9NXJ5 209 aa5.56□□□□□ -1.52
CHFR-211ENST00000535897 RABL2AQ9UBK7 228 aaPredicted RBP5.56□□□□□ -1.52
CHFR-211ENST00000535897 RABL2BQ9UNT1 228 aa5.56□□□□□ -1.52
CHFR-211ENST00000535897 MRPS16Q9Y3D3 137 aaKnown RBP5.56□□□□□ -1.52
CHFR-211ENST00000535897 SMCO3A2RU48 225 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 SNURFLB1AK76 121 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 IFNA5P01569 189 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 OR5G3P0C626 314 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 RPL7P18124 248 aaKnown RBP5.55□□□□□ -1.52
CHFR-211ENST00000535897 HOXA5P20719 270 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 RPP30P78346 268 aaKnown RBP5.55□□□□□ -1.52
CHFR-211ENST00000535897 MRPS10P82664 201 aaKnown RBP5.55□□□□□ -1.52
CHFR-211ENST00000535897 TMEM182Q6ZP80 229 aaPredicted RBP5.55□□□□□ -1.52
CHFR-211ENST00000535897 RNASE8Q8TDE3 154 aaKnown RBP5.55□□□□□ -1.52
CHFR-211ENST00000535897 RPUSD4Q96CM3 377 aaKnown RBP5.55□□□□□ -1.52
CHFR-211ENST00000535897 DIRAS2Q96HU8 199 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 SCGB3A2Q96PL1 93 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 MCUBQ9NWR8 336 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 SCP2D1Q9UJQ7 156 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 HIGD1AQ9Y241 93 aa5.55□□□□□ -1.52
CHFR-211ENST00000535897 FLG2Q5D862 2391 aaPredicted RBP5.55□□□□□ -1.52
CHFR-211ENST00000535897 PIGBOS1A0A0B4J2F0 54 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 FABP12A6NFH5 140 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 H3BP45 60 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 WRBO00258 174 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 MED6O75586 246 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 IL5P05113 134 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 CXCL3P19876 107 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 ANXA7P20073 488 aaKnown RBP5.54□□□□□ -1.52
CHFR-211ENST00000535897 IL18Q14116 193 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 PSG3Q16557 428 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 SPANXN2Q5MJ10 180 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 CDPF1Q6NVV7 123 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 ACOT7LQ6ZUV0 252 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 CCDC190Q86UF4 302 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 SMIM4Q8WVI0 70 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 C18orf15Q96N68 181 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 CIB3Q96Q77 187 aaPredicted RBP5.54□□□□□ -1.52
CHFR-211ENST00000535897 SHANK2-AS3Q9BTD1 123 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 SLIRPQ9GZT3 109 aaKnown RBP5.54□□□□□ -1.52
CHFR-211ENST00000535897 TMPRSS5Q9H3S3 457 aa5.54□□□□□ -1.52
CHFR-211ENST00000535897 TRGV2A0A075B6R0 118 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 H3BNG1 76 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 H3BRN7 92 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 J3KRW8 73 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 CTDSP2O14595 271 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 SIVA1O15304 175 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 HYPMO75409 117 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 SMR3BP02814 79 aaPredicted RBP5.53□□□□□ -1.52
CHFR-211ENST00000535897 LINC00869P0C866 280 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 VAMP1P23763 118 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 XGP55808 180 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 CNPY1Q3B7I2 92 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 SPANXN5Q5MJ07 72 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 GFI1BQ5VTD9 330 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 LINC00299Q6ZSB3 139 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 TMED4Q7Z7H5 227 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 S100A7AQ86SG5 101 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 PARD6GQ9BYG4 376 aaPredicted RBP5.53□□□□□ -1.52
CHFR-211ENST00000535897 MIXL1Q9H2W2 232 aa5.53□□□□□ -1.52
CHFR-211ENST00000535897 A0A096LPF7 62 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 FAM229AH3BQW9 127 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 J3QL48 77 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 SYNGR2O43760 224 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 PITX3O75364 302 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 SNRPCP09234 159 aaKnown RBP5.52□□□□□ -1.53
CHFR-211ENST00000535897 DNAH10OSP0CZ25 163 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 TNFSF8P32971 234 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 INPP1P49441 399 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 ICAM4Q14773 271 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 KIR3DS1Q14943 382 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 PYDC2Q56P42 97 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 Q6ZRN7 208 aaPredicted RBP5.52□□□□□ -1.53
CHFR-211ENST00000535897 CYP2G1PQ6ZSU1 146 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 Q6ZTI0 123 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 LINC00612Q8N6U2 182 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 C20orf144Q9BQM9 153 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 ARL6Q9H0F7 186 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 MDFICQ9P1T7 246 aa5.52□□□□□ -1.53
CHFR-211ENST00000535897 STRAPQ9Y3F4 350 aaKnown RBP5.52□□□□□ -1.53
CHFR-211ENST00000535897 A0A087X0K7 114 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 TRAV12-3A0A0B4J271 114 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 DUXBA0A1W2PPF3 345 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 ANKRD20A5PA0PJZ0 165 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 PMS2P5A8MQ11 134 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 PRSS46E5RG02 174 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 NXPH4O95158 308 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 KRTAP10-1P60331 282 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 LCN15Q6UWW0 184 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 NFE4Q86UQ8 179 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 S100ZQ8WXG8 99 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 VSIG2Q96IQ7 327 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 FAM210AQ96ND0 272 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 RNF24Q9Y225 148 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 TNFRSF18Q9Y5U5 241 aa5.51□□□□□ -1.53
CHFR-211ENST00000535897 VPS13BQ7Z7G8 4022 aa5.5□□□□□ -1.53
CHFR-211ENST00000535897 TRAV9-2A0A087WT02 112 aa5.5□□□□□ -1.53
CHFR-211ENST00000535897 A0A087WTM6 91 aa5.5□□□□□ -1.53
CHFR-211ENST00000535897 TRGV1A0A0A0MS02 117 aa5.5□□□□□ -1.53
CHFR-211ENST00000535897 H3BTX0 84 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms