RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 F5H697 171 aa8.45□□□□□ -1.06
CTNND1-238ENST00000534647 FGF7P21781 194 aa8.45□□□□□ -1.06
CTNND1-238ENST00000534647 SUB1P53999 127 aaKnown RBP eCLIP8.45□□□□□ -1.06
CTNND1-238ENST00000534647 DLK1P80370 383 aa8.45□□□□□ -1.06
CTNND1-238ENST00000534647 RELQ04864 619 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-238ENST00000534647 APRG1Q8IVJ8 170 aa8.45□□□□□ -1.06
CTNND1-238ENST00000534647 ZNF709Q8N972 641 aa8.45□□□□□ -1.06
CTNND1-238ENST00000534647 NHLRC2Q8NBF2 726 aa8.45□□□□□ -1.06
CTNND1-238ENST00000534647 WDR61Q9GZS3 305 aaKnown RBP8.45□□□□□ -1.06
CTNND1-238ENST00000534647 SH3BGRL3Q9H299 93 aa8.45□□□□□ -1.06
CTNND1-238ENST00000534647 PMS2P5A8MQ11 134 aa8.44□□□□□ -1.06
CTNND1-238ENST00000534647 NUPL2O15504 423 aaKnown RBP8.44□□□□□ -1.06
CTNND1-238ENST00000534647 TRIAP1O43715 76 aa8.44□□□□□ -1.06
CTNND1-238ENST00000534647 Q56UQ5 140 aa8.44□□□□□ -1.06
CTNND1-238ENST00000534647 LCE2AQ5TA79 106 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-238ENST00000534647 Q6ZRG5 221 aa8.44□□□□□ -1.06
CTNND1-238ENST00000534647 OR11H2Q8NH07 326 aa8.44□□□□□ -1.06
CTNND1-238ENST00000534647 PSMG3Q9BT73 122 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-238ENST00000534647 TIMM9Q9Y5J7 89 aa8.44□□□□□ -1.06
CTNND1-238ENST00000534647 IGHV3OR16-8A0A075B7F1 116 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 IGHV3-21A0A0B4J1V1 117 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 TRAV2A0A0B4J234 112 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 INS-IGF2F8WCM5 200 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 I3L2K1 104 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 ZNF207O43670 478 aaKnown RBP8.43□□□□□ -1.06
CTNND1-238ENST00000534647 NANOS2P60321 138 aaKnown RBP8.43□□□□□ -1.06
CTNND1-238ENST00000534647 RAB2AP61019 212 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 PAFAH1B2P68402 229 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 SERF2P84101 59 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 VWC2Q2TAL6 325 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 C2orf83Q53S99 150 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 PXDC1Q5TGL8 231 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 DPPA3Q6W0C5 159 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 ZNF114Q8NC26 417 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 FAM213BQ8TBF2 198 aa8.43□□□□□ -1.06
CTNND1-238ENST00000534647 C11orf94C9JXX5 98 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 TEX46H3BTG2 121 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 MPDU1O75352 247 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 RAB31Q13636 194 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 ZNF124Q15973 351 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 NEU1Q99519 415 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 RSG1Q9BU20 258 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 VSIRQ9H7M9 311 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 NPVFQ9HCQ7 196 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 KCNIP2Q9NS61 270 aa8.42□□□□□ -1.06
CTNND1-238ENST00000534647 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
CTNND1-238ENST00000534647 FNDC10F2Z333 226 aa8.41□□□□□ -1.06
CTNND1-238ENST00000534647 MBP02144 154 aa8.41□□□□□ -1.06
CTNND1-238ENST00000534647 RNASE2P10153 161 aaKnown RBP8.41□□□□□ -1.06
CTNND1-238ENST00000534647 AKR1C1Q04828 323 aa8.41□□□□□ -1.06
CTNND1-238ENST00000534647 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
CTNND1-238ENST00000534647 APLNQ9ULZ1 77 aa8.41□□□□□ -1.06
CTNND1-238ENST00000534647 WDR83OSQ9Y284 106 aa8.41□□□□□ -1.06
CTNND1-238ENST00000534647 YIF1AO95070 293 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 HBE1P02100 147 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 TFPI2P48307 235 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 RNF151Q2KHN1 245 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 BSXQ3C1V8 233 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 TMEM41BQ5BJD5 291 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 UQCC3Q6UW78 93 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 TCF24Q7RTU0 167 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 EIF4E3Q8N5X7 224 aaKnown RBP8.4□□□□□ -1.06
CTNND1-238ENST00000534647 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
CTNND1-238ENST00000534647 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
CTNND1-238ENST00000534647 FRAS1Q86XX4 4008 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 CORTO00230 105 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 GNG7O60262 68 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 MT-CO2P00403 227 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 CA1P00915 261 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-238ENST00000534647 GPX4P36969 197 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-238ENST00000534647 SRSF3P84103 164 aaKnown RBP8.39□□□□□ -1.07
CTNND1-238ENST00000534647 ACOT6Q3I5F7 207 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-238ENST00000534647 FFAR4Q5NUL3 377 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 PVRIGQ6DKI7 326 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 GBGT1Q8N5D6 347 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 Q8NAQ8 132 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 TMEM170AQ8WVE7 144 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 FAM210AQ96ND0 272 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 MS4A6AQ9H2W1 248 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 RFNGQ9Y644 331 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 HERC2O95714 4834 aa8.39□□□□□ -1.07
CTNND1-238ENST00000534647 IGKV3-7A0A075B6H7 116 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 IGHV3-49A0A0A0MS15 119 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 GIG44P09565 113 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-238ENST00000534647 OPRK1P41145 380 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 NPBWR1P48145 328 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 FHITP49789 147 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 LINC00336Q6ZUF6 198 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 PBDC1Q9BVG4 233 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 TREM1Q9NP99 234 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 SLC39A9Q9NUM3 307 aa8.38□□□□□ -1.07
CTNND1-238ENST00000534647 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
CTNND1-238ENST00000534647 IGLL5B9A064 214 aa8.37□□□□□ -1.07
CTNND1-238ENST00000534647 KRBOX1C9JBD0 128 aa8.37□□□□□ -1.07
CTNND1-238ENST00000534647 DNASE2O00115 360 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-238ENST00000534647 AGPAT2O15120 278 aa8.37□□□□□ -1.07
CTNND1-238ENST00000534647 DEFB4AO15263 64 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms