RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ITLN2Q8WWU7 325 aaPredicted RBP12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 TNFRSF18Q9Y5U5 241 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 H3BVH4 76 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 IFI27L1Q96BM0 104 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 PEMTQ9UBM1 199 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 UBE2L6O14933 153 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 DUSP14O95147 198 aaKnown RBP12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 YPEL3P61236 119 aaPredicted RBP12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 C10orf142B7Z368 130 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 SH2D1AO60880 128 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 CD33P20138 364 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 C11orf52Q96A22 123 aa12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 GEMIN7Q9H840 131 aaKnown RBP12.3□□□□□ -0.44
PCDHA3-202ENST00000532566 FAM181BA6NEQ2 426 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 D6R8Y8 96 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 C3orf79P0CE67 100 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 VWC2Q2TAL6 325 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 LDLRAD2Q5SZI1 272 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 ZNF114Q8NC26 417 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 IGHV2-5P01817 119 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 SLC25A2Q9BXI2 301 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 PRO3102Q9H379 93 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 SPRNQ5BIV9 151 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 PLA2G2EQ9NZK7 142 aa12.29□□□□□ -0.44
PCDHA3-202ENST00000532566 SMIM13P0DJ93 91 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 EVI2AP22794 236 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 SRSF1Q07955 248 aaKnown RBP eCLIP12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 TMEM249Q2WGJ8 235 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 PLP1P60201 277 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 NDPQ00604 133 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 IGFL4Q6B9Z1 124 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 ST20Q9HBF5 79 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 CTSZQ9UBR2 303 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 H7C2G1 150 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 COX6CP09669 75 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 SRD5A1P18405 259 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 Q0VG73 95 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 ZNF256Q9Y2P7 627 aaPredicted RBP12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 NCR2O95944 276 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 TCF15Q12870 199 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 USMG5Q96IX5 58 aa12.28□□□□□ -0.44
PCDHA3-202ENST00000532566 NDUFB8O95169 186 aa12.27□□□□□ -0.44
PCDHA3-202ENST00000532566 ZNF492Q9P255 531 aa12.27□□□□□ -0.44
PCDHA3-202ENST00000532566 SHISA9B4DS77 424 aa12.27□□□□□ -0.45
PCDHA3-202ENST00000532566 C8orf31Q8N9H6 132 aa12.27□□□□□ -0.45
PCDHA3-202ENST00000532566 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
PCDHA3-202ENST00000532566 ORMDL2Q53FV1 153 aa12.27□□□□□ -0.45
PCDHA3-202ENST00000532566 FAM110DQ8TAY7 271 aaPredicted RBP12.27□□□□□ -0.45
PCDHA3-202ENST00000532566 MED12LQ86YW9 2145 aa12.27□□□□□ -0.45
PCDHA3-202ENST00000532566 MYO18BQ8IUG5 2567 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 FAM223BA6NKX1 122 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 COTL1Q14019 142 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 FAM223AQ8IWN6 122 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 TRBV19A0A075B6N1 114 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 ATP6V0E1O15342 81 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 PF4P02776 101 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 CT83Q5H943 113 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 ZNF664Q8N3J9 261 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 LSM4Q9Y4Z0 139 aaKnown RBP12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 V9GYV3 84 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 PTPRSQ13332 1948 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 FAM231BA6NCW3 169 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 SEM1Q6ZVN7 128 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 LINC01587Q99440 93 aa12.26□□□□□ -0.45
PCDHA3-202ENST00000532566 A0A1B0GUS0 222 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 NDUFS6O75380 124 aaKnown RBP12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 DPM2O94777 84 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 NDUFA3O95167 84 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 FNDC4Q9H6D8 234 aaPredicted RBP12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 FAM231DQ6ZW35 169 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 NDUFS8O00217 210 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 CIRBPQ14011 172 aaKnown RBP12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 LINC00477Q96M19 166 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 IGHV2-70DA0A0C4DH43 119 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 IGLC1P0CG04 106 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 CYSLTR1Q9Y271 337 aa12.25□□□□□ -0.45
PCDHA3-202ENST00000532566 ZNF418Q8TF45 676 aaPredicted RBP12.24□□□□□ -0.45
PCDHA3-202ENST00000532566 MS4A6AQ9H2W1 248 aa12.24□□□□□ -0.45
PCDHA3-202ENST00000532566 PSMB11A5LHX3 300 aa12.24□□□□□ -0.45
PCDHA3-202ENST00000532566 ARMS2P0C7Q2 107 aa12.24□□□□□ -0.45
PCDHA3-202ENST00000532566 TMEM75Q8N9X5 138 aa12.24□□□□□ -0.45
PCDHA3-202ENST00000532566 EML6Q6ZMW3 1958 aa12.24□□□□□ -0.45
PCDHA3-202ENST00000532566 WISP2O76076 250 aa12.24□□□□□ -0.45
PCDHA3-202ENST00000532566 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
PCDHA3-202ENST00000532566 C22orf46C9J442 243 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 ZNF688P0C7X2 276 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 LINC00469Q8N7U9 141 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 C18orf32Q8TCD1 76 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 A6NNC1 897 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 CRIP3Q6Q6R5 217 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 AMN1Q8IY45 258 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 YAE1D1Q9NRH1 226 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 SELENOKQ9Y6D0 94 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 CENPFP49454 3210 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 IGLC7A0M8Q6 106 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 SLC25A16P16260 332 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms