RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PTPRQQ9UMZ3 2332 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 G3V318 75 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 CA1P00915 261 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-221ENST00000532331 IGHV4-59P01825 116 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 ELANEP08246 267 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 RPP25LQ8N5L8 163 aaKnown RBP9.1□□□□□ -0.95
PTPRK-221ENST00000532331 CHCHD1Q96BP2 118 aaKnown RBP9.1□□□□□ -0.95
PTPRK-221ENST00000532331 TMEM242Q9NWH2 141 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 A0A1B0GW64 132 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 ZGRF1Q86YA3 2104 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 WDR86Q86TI4 376 aa9.1□□□□□ -0.95
PTPRK-221ENST00000532331 ADAMTS9Q9P2N4 1935 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 A0A087WX48 190 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 ADARB2-AS1A8MUL3 147 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 APOMO95445 188 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 MPDZO75970 2070 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 SRRM4A7MD48 611 aaKnown RBP9.09□□□□□ -0.95
PTPRK-221ENST00000532331 RNASE2P10153 161 aaKnown RBP9.09□□□□□ -0.95
PTPRK-221ENST00000532331 RIPPLY3P57055 190 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 LINC00205P59089 165 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 ZNF524Q96C55 264 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 PCNX1Q96RV3 2341 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 C15orf62A8K5M9 175 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
PTPRK-221ENST00000532331 CHTOPQ9Y3Y2 248 aaKnown RBP9.09□□□□□ -0.95
PTPRK-221ENST00000532331 PRB4P10163 310 aaPredicted RBP9.09□□□□□ -0.96
PTPRK-221ENST00000532331 HOXB4P17483 251 aaPredicted RBP9.09□□□□□ -0.96
PTPRK-221ENST00000532331 RNF182Q8N6D2 247 aa9.09□□□□□ -0.96
PTPRK-221ENST00000532331 GZMBP10144 247 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 MST1LQ2TV78 715 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 NIT1Q86X76 327 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 LINC00311Q8N616 119 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 C22orf46C9J442 243 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 DKK1O94907 266 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 C17orf58Q2M2W7 97 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 ZNF833PQ6ZTB9 187 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 PHF3Q92576 2039 aaKnown RBP9.08□□□□□ -0.96
PTPRK-221ENST00000532331 TRAV12-3A0A0B4J271 114 aa9.08□□□□□ -0.96
PTPRK-221ENST00000532331 PSG3Q16557 428 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 MRAPQ8TCY5 172 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 DPH3P1Q9H4G8 78 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 GHRHP01286 108 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 TRBV24-1A0A075B6N3 115 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 LAGE3Q14657 143 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 FBXL19-AS1Q494R0 122 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 LYZL1Q6UWQ5 148 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 IFI27L1Q96BM0 104 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 A0A0G2JRQ6 117 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 AMBPP02760 352 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 DEFB130BP0DP73 79 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 DEFB130AP0DP74 79 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 CFPP27918 469 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 RPL36AP83881 106 aaKnown RBP9.07□□□□□ -0.96
PTPRK-221ENST00000532331 RASL11AQ6T310 242 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 LINC01551Q86U37 167 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 RPL36ALQ969Q0 106 aaKnown RBP9.07□□□□□ -0.96
PTPRK-221ENST00000532331 RFNGQ9Y644 331 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 LY96Q9Y6Y9 160 aa9.07□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BKO60814 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 SH2D1AO60880 128 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 IGKCP01834 107 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BJP06899 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BOP23527 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BBP33778 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BDP58876 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BCP62807 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST2H2BEQ16778 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 TCTEX1D4Q5JR98 221 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BHQ93079 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BNQ99877 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 HIST1H2BMQ99879 126 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 A0A1W2PPI3 338 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 IGHV3-53P01767 116 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 TTC32Q5I0X7 151 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 MYLKQ15746 1914 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 NDUFB8O95169 186 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 TRAV9-2A0A087WT02 112 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 SLC25A20O43772 301 aa9.06□□□□□ -0.96
PTPRK-221ENST00000532331 SRSF4Q08170 494 aaKnown RBP9.06□□□□□ -0.96
PTPRK-221ENST00000532331 TP53BP1Q12888 1972 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-221ENST00000532331 CREBBPQ92793 2442 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 DERL1Q9BUN8 251 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 DAD1P61803 113 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 Q6ZRM9 215 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 Q8TAT8 98 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 ZNF876PQ49A33 203 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 SEM1Q6ZVN7 128 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 LINC00469Q8N7U9 141 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 SMPXQ9UHP9 88 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 A0A1B0GWB2 263 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 IGHV4-38-2P0DP08 117 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 IGKV1-6A0A0C4DH72 117 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 D6R8Y8 96 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 LYL1P12980 280 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 PLNP26678 52 aa9.05□□□□□ -0.96
PTPRK-221ENST00000532331 SHANK2-AS3Q9BTD1 123 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms