RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 CEP295Q9C0D2 2601 aa13.21□□□□□ -0.29
VPS26B-206ENST00000531741 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.2□□□□□ -0.3
VPS26B-206ENST00000531741 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 TOX4O94842 621 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 PSG9Q00887 426 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 TXN2Q99757 166 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 ARHGAP32A7KAX9 2087 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 TPRP12270 2363 aaKnown RBP13.2□□□□□ -0.3
VPS26B-206ENST00000531741 DCHS1Q96JQ0 3298 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 TRAV9-2A0A087WT02 112 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 RIGQ13278 110 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 Q71RC1 249 aaPredicted RBP13.2□□□□□ -0.3
VPS26B-206ENST00000531741 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
VPS26B-206ENST00000531741 FBLL1A6NHQ2 334 aaKnown RBP13.19□□□□□ -0.3
VPS26B-206ENST00000531741 OR5AL1P0C617 328 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 LINC00614P0C842 121 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 RPL7P18124 248 aaKnown RBP13.19□□□□□ -0.3
VPS26B-206ENST00000531741 KLK9Q2XQG4 91 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 Q56UQ5 140 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 LCN12Q6JVE5 192 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 TMEM70Q9BUB7 260 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 SIRPDQ9H106 197 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 KLK9Q9UKQ9 250 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 ZZEF1O43149 2961 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 A0A1W2PRD5 423 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 A0A1W2PRF3 423 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 A0A1W2PRM7 423 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 NCBP2LA6PVI3 153 aaKnown RBP13.19□□□□□ -0.3
VPS26B-206ENST00000531741 CRIP1P50238 77 aa13.19□□□□□ -0.3
VPS26B-206ENST00000531741 IGHV1-24A0A0C4DH33 117 aa13.18□□□□□ -0.3
VPS26B-206ENST00000531741 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
VPS26B-206ENST00000531741 TMEM11P17152 192 aa13.18□□□□□ -0.3
VPS26B-206ENST00000531741 ZFP36P26651 326 aaKnown RBP13.18□□□□□ -0.3
VPS26B-206ENST00000531741 CSN1S1P47710 185 aa13.18□□□□□ -0.3
VPS26B-206ENST00000531741 S4R3C0 116 aa13.18□□□□□ -0.3
VPS26B-206ENST00000531741 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
VPS26B-206ENST00000531741 M0R3E3 92 aa13.17□□□□□ -0.3
VPS26B-206ENST00000531741 NDUFB8O95169 186 aa13.17□□□□□ -0.3
VPS26B-206ENST00000531741 CT45A10P0DMU9 189 aa13.17□□□□□ -0.3
VPS26B-206ENST00000531741 S100A7P31151 101 aa13.17□□□□□ -0.3
VPS26B-206ENST00000531741 BCL6BQ8N143 479 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-206ENST00000531741 CTSGP08311 255 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 ARMS2P0C7Q2 107 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 FAM106CPP0CH98 169 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 ZNF493Q6ZR52 646 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 Q8N9W7 124 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 COL5A1-AS1Q5SY13 56 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 Q6ZN92 141 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 CLEC5AQ9NY25 188 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 MRPS16Q9Y3D3 137 aaKnown RBP13.16□□□□□ -0.3
VPS26B-206ENST00000531741 SPTA1P02549 2419 aa13.16□□□□□ -0.3
VPS26B-206ENST00000531741 IGHV2-70DA0A0C4DH43 119 aa13.15□□□□□ -0.3
VPS26B-206ENST00000531741 M0QZ24 198 aa13.15□□□□□ -0.3
VPS26B-206ENST00000531741 LEPROTL1O95214 131 aa13.15□□□□□ -0.3
VPS26B-206ENST00000531741 UBE2E1P51965 193 aa13.15□□□□□ -0.3
VPS26B-206ENST00000531741 HNRNPA3P51991 378 aaKnown RBP13.15□□□□□ -0.3
VPS26B-206ENST00000531741 SAPCD1Q5SSQ6 148 aa13.15□□□□□ -0.3
VPS26B-206ENST00000531741 ATOH7Q8N100 152 aa13.15□□□□□ -0.3
VPS26B-206ENST00000531741 RABAC1Q9UI14 185 aa13.15□□□□□ -0.3
VPS26B-206ENST00000531741 A0A1W2PPR1 153 aa13.14□□□□□ -0.31
VPS26B-206ENST00000531741 SYS1-DBNDD2H3BUS1 97 aa13.14□□□□□ -0.31
VPS26B-206ENST00000531741 GAGE1Q13065 139 aa13.14□□□□□ -0.31
VPS26B-206ENST00000531741 PRR31Q5SQ13 230 aa13.14□□□□□ -0.31
VPS26B-206ENST00000531741 LPAR2Q9HBW0 351 aa13.14□□□□□ -0.31
VPS26B-206ENST00000531741 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
VPS26B-206ENST00000531741 SPATA12Q7Z6I5 190 aa13.14□□□□□ -0.31
VPS26B-206ENST00000531741 FAM110DQ8TAY7 271 aaPredicted RBP13.14□□□□□ -0.31
VPS26B-206ENST00000531741 C8orf49Q96NF6 230 aa13.14□□□□□ -0.31
VPS26B-206ENST00000531741 TSPOP30536 169 aa13.13□□□□□ -0.31
VPS26B-206ENST00000531741 MAJINQ3KP22 176 aa13.13□□□□□ -0.31
VPS26B-206ENST00000531741 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
VPS26B-206ENST00000531741 LAMTOR2Q9Y2Q5 125 aa13.13□□□□□ -0.31
VPS26B-206ENST00000531741 IGLL1P15814 213 aa13.12□□□□□ -0.31
VPS26B-206ENST00000531741 ZNF25P17030 456 aaPredicted RBP13.12□□□□□ -0.31
VPS26B-206ENST00000531741 EFNA4P52798 201 aa13.12□□□□□ -0.31
VPS26B-206ENST00000531741 RAB9AP51151 201 aa13.12□□□□□ -0.31
VPS26B-206ENST00000531741 PET117Q6UWS5 81 aa13.12□□□□□ -0.31
VPS26B-206ENST00000531741 PRR25Q96S07 402 aa13.12□□□□□ -0.31
VPS26B-206ENST00000531741 HSPB8Q9UJY1 196 aa13.12□□□□□ -0.31
VPS26B-206ENST00000531741 TMEM189A5PLL7 270 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 SH2D1AO60880 128 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 ZNF502Q8TBZ5 544 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 ASCL2Q99929 193 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 TMEM208Q9BTX3 173 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 ST20Q9HBF5 79 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 SMAD5-AS1Q9Y6J3 95 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 DLEU1O43261 78 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 IGHV3-23P01764 117 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 RPS20P60866 119 aaKnown RBP13.11□□□□□ -0.31
VPS26B-206ENST00000531741 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
VPS26B-206ENST00000531741 BATFQ16520 125 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 COL25A1Q9BXS0 654 aaPredicted RBP13.11□□□□□ -0.31
VPS26B-206ENST00000531741 U3KQK5 164 aa13.11□□□□□ -0.31
VPS26B-206ENST00000531741 NDUFS7O75251 213 aa13.1□□□□□ -0.31
VPS26B-206ENST00000531741 G0S2P27469 103 aa13.1□□□□□ -0.31
VPS26B-206ENST00000531741 LINC00173Q6ZV60 143 aa13.1□□□□□ -0.31
VPS26B-206ENST00000531741 TMUB1Q9BVT8 246 aa13.1□□□□□ -0.31
VPS26B-206ENST00000531741 MAP1LC3CQ9BXW4 147 aa13.1□□□□□ -0.31
VPS26B-206ENST00000531741 TMEM191AQ9H0A3 160 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms