RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 Q9H3A6 140 aa10.36□□□□□ -0.75
CAPN1-219ENST00000530495 TRAV26-1A0A087WT03 109 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 PMS2P5A8MQ11 134 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 H7BYZ3 331 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 LINC00869P0C866 280 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 BTF3P20290 206 aaKnown RBP10.35□□□□□ -0.75
CAPN1-219ENST00000530495 TMBIM6P55061 237 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 PPP1R1AQ13522 171 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 OR5I1Q13606 314 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 TTC32Q5I0X7 151 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 S100A7AQ86SG5 101 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 LRRC20Q8TCA0 184 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 RXFP4Q8TDU9 374 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 RPUSD4Q96CM3 377 aaKnown RBP10.35□□□□□ -0.75
CAPN1-219ENST00000530495 C20orf144Q9BQM9 153 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
CAPN1-219ENST00000530495 SLIRPQ9GZT3 109 aaKnown RBP10.35□□□□□ -0.75
CAPN1-219ENST00000530495 A0A1W2PPQ1 181 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 SMCO3A2RU48 225 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 H3BNG1 76 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 MRPS12O15235 138 aaKnown RBP10.34□□□□□ -0.75
CAPN1-219ENST00000530495 ADAP1O75689 374 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 M6PRP20645 277 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 AP3S2P59780 193 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 ESRGQ1W209 222 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 PATE2Q6UY27 113 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 TOMM5Q8N4H5 51 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 TRIM63Q969Q1 353 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 BCL7BQ9BQE9 202 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 RNF24Q9Y225 148 aa10.34□□□□□ -0.75
CAPN1-219ENST00000530495 K7EPK0 472 aa10.33□□□□□ -0.76
CAPN1-219ENST00000530495 ZNF701M0R085 212 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-219ENST00000530495 CXCL2P19875 107 aa10.33□□□□□ -0.76
CAPN1-219ENST00000530495 ANXA7P20073 488 aaKnown RBP10.33□□□□□ -0.76
CAPN1-219ENST00000530495 HOXA5P20719 270 aa10.33□□□□□ -0.76
CAPN1-219ENST00000530495 NPVFQ9HCQ7 196 aa10.33□□□□□ -0.76
CAPN1-219ENST00000530495 PSENENQ9NZ42 101 aa10.33□□□□□ -0.76
CAPN1-219ENST00000530495 FNDC10F2Z333 226 aa10.32□□□□□ -0.76
CAPN1-219ENST00000530495 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-219ENST00000530495 POLR2GP62487 172 aaKnown RBP eCLIP10.32□□□□□ -0.76
CAPN1-219ENST00000530495 KIR3DS1Q14943 382 aa10.32□□□□□ -0.76
CAPN1-219ENST00000530495 C4orf46Q504U0 113 aa10.32□□□□□ -0.76
CAPN1-219ENST00000530495 CCDC28AQ8IWP9 274 aa10.32□□□□□ -0.76
CAPN1-219ENST00000530495 DEDD2Q8WXF8 326 aa10.32□□□□□ -0.76
CAPN1-219ENST00000530495 SMIM8Q96KF7 97 aa10.32□□□□□ -0.76
CAPN1-219ENST00000530495 ARL6Q9H0F7 186 aa10.32□□□□□ -0.76
CAPN1-219ENST00000530495 ARV1Q9H2C2 271 aa10.32□□□□□ -0.76
CAPN1-219ENST00000530495 ZNF331Q9NQX6 463 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-219ENST00000530495 LRP1BQ9NZR2 4599 aa10.31□□□□□ -0.76
CAPN1-219ENST00000530495 A0A0J9YY99 117 aa10.31□□□□□ -0.76
CAPN1-219ENST00000530495 DLK1P80370 383 aa10.31□□□□□ -0.76
CAPN1-219ENST00000530495 PYDC2Q56P42 97 aa10.31□□□□□ -0.76
CAPN1-219ENST00000530495 PXDC1Q5TGL8 231 aa10.31□□□□□ -0.76
CAPN1-219ENST00000530495 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
CAPN1-219ENST00000530495 MCFD2Q8NI22 146 aa10.31□□□□□ -0.76
CAPN1-219ENST00000530495 SLC50A1Q9BRV3 221 aa10.31□□□□□ -0.76
CAPN1-219ENST00000530495 MRPS16Q9Y3D3 137 aaKnown RBP10.31□□□□□ -0.76
CAPN1-219ENST00000530495 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 CCNKO75909 580 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 GAGE7O76087 117 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 RLN2P04090 185 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 UBE2MP61081 183 aaKnown RBP10.3□□□□□ -0.76
CAPN1-219ENST00000530495 GFI1BQ5VTD9 330 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 TEPPQ6URK8 271 aa10.3□□□□□ -0.76
CAPN1-219ENST00000530495 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
CAPN1-219ENST00000530495 RRAS2P62070 204 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-219ENST00000530495 TMEM14EPQ6UXP3 125 aa10.29□□□□□ -0.76
CAPN1-219ENST00000530495 LINC00305Q7Z4B0 112 aa10.29□□□□□ -0.76
CAPN1-219ENST00000530495 CCDC190Q86UF4 302 aa10.29□□□□□ -0.76
CAPN1-219ENST00000530495 ZBTB8BQ8NAP8 495 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-219ENST00000530495 OR10P1Q8NGE3 313 aa10.29□□□□□ -0.76
CAPN1-219ENST00000530495 PARD6GQ9BYG4 376 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-219ENST00000530495 ZNF586Q9NXT0 402 aa10.29□□□□□ -0.76
CAPN1-219ENST00000530495 SNURFLB1AK76 121 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 H3BMQ9 156 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 GOSR2O14653 212 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 SSSCA1O60232 199 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 SNRPCP09234 159 aaKnown RBP10.28□□□□□ -0.76
CAPN1-219ENST00000530495 METTL15P1P0C7V9 234 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 SLC38A11Q08AI6 406 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
CAPN1-219ENST00000530495 BPIFA4PQ86YQ2 179 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 V9GYH0 126 aa10.28□□□□□ -0.76
CAPN1-219ENST00000530495 ZNF546Q86UE3 836 aa10.27□□□□□ -0.77
CAPN1-219ENST00000530495 TMEM37Q8WXS4 190 aa10.27□□□□□ -0.77
CAPN1-219ENST00000530495 SAT2Q96F10 170 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-219ENST00000530495 VSIG2Q96IQ7 327 aa10.27□□□□□ -0.77
CAPN1-219ENST00000530495 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.77
CAPN1-219ENST00000530495 MGAT4CQ9UBM8 478 aa10.27□□□□□ -0.77
CAPN1-219ENST00000530495 TRAV12-3A0A0B4J271 114 aa10.26□□□□□ -0.77
CAPN1-219ENST00000530495 SLC17A3O00476 420 aa10.26□□□□□ -0.77
CAPN1-219ENST00000530495 AGPAT2O15120 278 aa10.26□□□□□ -0.77
CAPN1-219ENST00000530495 TSC22D2O75157 780 aa10.26□□□□□ -0.77
CAPN1-219ENST00000530495 CT45A10P0DMU9 189 aa10.26□□□□□ -0.77
CAPN1-219ENST00000530495 IGLC2P0DOY2 106 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms