RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 IGLL1P15814 213 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 HLA-DMBP28068 263 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 S100A7P31151 101 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 BMI1P35226 326 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 RANP62826 216 aaKnown RBP8.03□□□□□ -1.12
SOX6-213ENST00000530378 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 C1orf194Q5T5A4 169 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 LRRC20Q8TCA0 184 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 MARC2Q969Z3 335 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 TMEM14CQ9P0S9 112 aa8.03□□□□□ -1.12
SOX6-213ENST00000530378 YTHDF2Q9Y5A9 579 aaKnown RBP8.03□□□□□ -1.12
SOX6-213ENST00000530378 MGAM2Q2M2H8 2515 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 PAGE4O60829 102 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 NBEAP1P0C6P0 100 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 GUCA2BQ16661 112 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 DEFB114Q30KQ6 69 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 TOR2AQ5JU69 321 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 CST9LP1Q5W188 147 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 RBPMS2Q6ZRY4 209 aaKnown RBP8.02□□□□□ -1.13
SOX6-213ENST00000530378 EXOC3-AS1Q8N2X6 119 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 MS4A6AQ9H2W1 248 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 RPH3ALQ9UNE2 315 aa8.02□□□□□ -1.13
SOX6-213ENST00000530378 HELTA6NFD8 242 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 NDUFB4O95168 129 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 HIST1H1EP10412 219 aaKnown RBP8.01□□□□□ -1.13
SOX6-213ENST00000530378 ATP5G3P48201 142 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 DEFB1P60022 68 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 FAM24BQ8N5W8 94 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 GPR82Q96P67 336 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 RARRES2Q99969 163 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 NRN1Q9NPD7 142 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 TMEM167BQ9NRX6 74 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 TRBV19A0A075B6N1 114 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 TRAV1-1A0A0B4J248 108 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 DNASE2O00115 360 aaPredicted RBP8.01□□□□□ -1.13
SOX6-213ENST00000530378 WIPF1O43516 503 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 FAM90A2PQ658T7 463 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 C16orf92Q96LL3 132 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 AGRNO00468 2067 aa8.01□□□□□ -1.13
SOX6-213ENST00000530378 FAM74A7A6NL05 159 aa8□□□□□ -1.13
SOX6-213ENST00000530378 GGTLC3B5MD39 225 aa8□□□□□ -1.13
SOX6-213ENST00000530378 M0R3E3 92 aa8□□□□□ -1.13
SOX6-213ENST00000530378 GNG5P63218 68 aa8□□□□□ -1.13
SOX6-213ENST00000530378 SRSF3P84103 164 aaKnown RBP8□□□□□ -1.13
SOX6-213ENST00000530378 ICAM4Q14773 271 aa8□□□□□ -1.13
SOX6-213ENST00000530378 LYPD6BQ8NI32 183 aa8□□□□□ -1.13
SOX6-213ENST00000530378 RXFP4Q8TDU9 374 aa8□□□□□ -1.13
SOX6-213ENST00000530378 LINC00052Q96N35 136 aa8□□□□□ -1.13
SOX6-213ENST00000530378 EIF5A2Q9GZV4 153 aaKnown RBP8□□□□□ -1.13
SOX6-213ENST00000530378 Q9H3A6 140 aa8□□□□□ -1.13
SOX6-213ENST00000530378 A0A087X0K7 114 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 TRAV8-2A0A0B4J237 113 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 ZNF705FA8MVS1 300 aaPredicted RBP7.99□□□□□ -1.13
SOX6-213ENST00000530378 IGLV1-51P01701 117 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 ZNF688P0C7X2 276 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 BCL2P10415 239 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 PSMB3P49720 205 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 OXLD1Q5BKU9 147 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 COMMD7Q86VX2 200 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 C20orf173Q96LM9 149 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 RNF24Q9Y225 148 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 LOC102723971A0A1B0GUV8 181 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 C11orf94C9JXX5 98 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 IFNA1P01562 189 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 CEBPGP53567 150 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 GUK1Q16774 197 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 DCANP1Q8TF63 244 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 MANBALQ9NQG1 85 aa7.99□□□□□ -1.13
SOX6-213ENST00000530378 PGPA6NDG6 321 aa7.98□□□□□ -1.13
SOX6-213ENST00000530378 RBFOX3A6NFN3 312 aa7.98□□□□□ -1.13
SOX6-213ENST00000530378 SOCS3O14543 225 aa7.98□□□□□ -1.13
SOX6-213ENST00000530378 SLC25A5P05141 298 aaKnown RBP7.98□□□□□ -1.13
SOX6-213ENST00000530378 SUMO1P63165 101 aaKnown RBP7.98□□□□□ -1.13
SOX6-213ENST00000530378 ZNF124Q15973 351 aa7.98□□□□□ -1.13
SOX6-213ENST00000530378 PSMG4Q5JS54 123 aa7.98□□□□□ -1.13
SOX6-213ENST00000530378 ASCL2Q99929 193 aa7.98□□□□□ -1.13
SOX6-213ENST00000530378 ZNF331Q9NQX6 463 aaPredicted RBP7.98□□□□□ -1.13
SOX6-213ENST00000530378 SIGLEC8Q9NYZ4 499 aa7.98□□□□□ -1.13
SOX6-213ENST00000530378 PRAC2D3DTV9 90 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 F6UB75 175 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 K7EQG2 157 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 TSPAN4O14817 238 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 ZNF705DP0CH99 300 aaPredicted RBP7.97□□□□□ -1.13
SOX6-213ENST00000530378 ZNF705BP0CI00 300 aaPredicted RBP7.97□□□□□ -1.13
SOX6-213ENST00000530378 SLC7A5P1Q8MH63 180 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 ZNF738Q8NE65 137 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 WFDC9Q8NEX5 89 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 SUN5Q8TC36 379 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 SGK494Q96LW2 274 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 WFDC10AQ9H1F0 79 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 AAMDCQ9H7C9 122 aa7.97□□□□□ -1.13
SOX6-213ENST00000530378 SCO2A0A1W2PP80 73 aa7.96□□□□□ -1.13
SOX6-213ENST00000530378 PAFAH1B2P68402 229 aa7.96□□□□□ -1.13
SOX6-213ENST00000530378 PSG9Q00887 426 aa7.96□□□□□ -1.13
SOX6-213ENST00000530378 MEF2BQ02080 365 aaPredicted RBP7.96□□□□□ -1.13
SOX6-213ENST00000530378 PDE6HQ13956 83 aa7.96□□□□□ -1.13
SOX6-213ENST00000530378 LCN12Q6JVE5 192 aa7.96□□□□□ -1.13
SOX6-213ENST00000530378 SLC50A1Q9BRV3 221 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms