RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	ZNF329	Q86UD4	541 aa		11.49	□□□□□ -0.57
NR1H3-231	ENST00000529540	C22orf15	Q8WYQ4	148 aa		11.49	□□□□□ -0.57
NR1H3-231	ENST00000529540	SMIM12	Q96EX1	92 aa		11.49	□□□□□ -0.57
NR1H3-231	ENST00000529540	ZAN	Q9Y493	2812 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	TRAV9-2	A0A087WT02	112 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	SRRM4	A7MD48	611 aa	Known RBP	11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	TOMM40	O96008	361 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	SAA1	P0DJI8	122 aa	Predicted RBP	11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	TSPO	P30536	169 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	PLGLA	Q15195	96 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	GDF5OS	Q5U4N7	250 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	DMRTA1	Q5VZB9	504 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	ZNF418	Q8TF45	676 aa	Predicted RBP	11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	JMJD8	Q96S16	334 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	NDUFA4L2	Q9NRX3	87 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	MOB4	Q9Y3A3	225 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	TEX15	Q9BXT5	2789 aa		11.48	□□□□□ -0.57
NR1H3-231	ENST00000529540	SETX	Q7Z333	2677 aa	Known RBP	11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540		A0A1B0GXF2	115 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	FAM181B	A6NEQ2	426 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	NCBP2L	A6PVI3	153 aa	Known RBP	11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	CYSRT1	A8MQ03	144 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	IGLV2-23	P01705	113 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	NTF3	P20783	257 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	FAM19A2	Q8N3H0	131 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	THAP8	Q8NA92	274 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	NUP35	Q8NFH5	326 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	TMEM167A	Q8TBQ9	72 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	PIFO	Q8TCI5	191 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	PAXX	Q9BUH6	204 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	VPREB3	Q9UKI3	123 aa		11.47	□□□□□ -0.57
NR1H3-231	ENST00000529540	TRAV5	A0A0B4J249	113 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540		A0A1W2PN81	502 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540		A6NDX4	124 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	SLC25A17	O43808	307 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	MYCNOS	P40205	109 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	MFAP2	P55001	183 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	ERH	P84090	104 aa	Known RBP	11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	TNXA	Q16473	311 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	MORN5	Q5VZ52	161 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	PPP1R27	Q86WC6	154 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	NUDT10	Q8NFP7	164 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	NUDT11	Q96G61	164 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	TNFRSF19	Q9NS68	423 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	NAV3	Q8IVL0	2385 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	HIVEP2	P31629	2446 aa		11.46	□□□□□ -0.57
NR1H3-231	ENST00000529540	TCF21	O43680	179 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	COX7A2P2	O60397	106 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	HSBP1	O75506	76 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	CA1	P00915	261 aa	Predicted RBP	11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	HIST1H1E	P10412	219 aa	Known RBP	11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	CD24	P25063	80 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	UBE2G1	P62253	170 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	RPL8	P62917	257 aa	Known RBP	11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	C5orf64	Q2M2E5	130 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	ZNF48	Q96MX3	618 aa	Predicted RBP	11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	RASL11B	Q9BPW5	248 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	WNT10A	Q9GZT5	417 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	GSX1	Q9H4S2	264 aa	Predicted RBP	11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	SIGLEC9	Q9Y336	463 aa		11.46	□□□□□ -0.58
NR1H3-231	ENST00000529540	ACAN	P16112	2415 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	TCRBV4S1A1T	A0A5B7	111 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	INAFM1	C9JVW0	142 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540		M0R2Z0	102 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	IGHV4-59	P01825	116 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	MLANA	Q16655	118 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	C10orf113	Q5VZT2	155 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	EBLN2	Q6P2I7	272 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	FXYD5	Q96DB9	178 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	ZNF355P	Q9NSJ1	428 aa		11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	SOX21	Q9Y651	276 aa	Predicted RBP	11.45	□□□□□ -0.58
NR1H3-231	ENST00000529540	C2orf70	A6NJV1	201 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	HOXA3	O43365	443 aa	Predicted RBP	11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	CRLF1	O75462	422 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	CRYGB	P07316	175 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	CT83	Q5H943	113 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	PATE2	Q6UY27	113 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	NHLRC2	Q8NBF2	726 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	OR2D3	Q8NGH3	330 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	RITA1	Q96K30	269 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	LINC00479	Q96M42	142 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	COX11	Q9Y6N1	276 aa		11.44	□□□□□ -0.58
NR1H3-231	ENST00000529540	HLA-DRB1	P01911	266 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	LCN12	Q6JVE5	192 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540		Q8N9W7	124 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	STXBP6	Q8NFX7	210 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	OR10W1	Q8NGF6	305 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	OR2T6	Q8NHC8	308 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	FBXL15	Q9H469	300 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	ZNF492	Q9P255	531 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	KLF12	Q9Y4X4	402 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	CELSR1	Q9NYQ6	3014 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	IGKV1D-37	A0A075B6S9	117 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	IGLC7	A0M8Q6	106 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	PYY	P10082	97 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	CNTFR	P26992	372 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	LY6E	Q16553	131 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540		Q71RC1	249 aa	Predicted RBP	11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms