RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 VBP1P61758 197 aa12.82□□□□□ -0.36
SSRP1-204ENST00000529002 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
SSRP1-204ENST00000529002 SHANK2-AS3Q9BTD1 123 aa12.82□□□□□ -0.36
SSRP1-204ENST00000529002 CACFD1Q9UGQ2 172 aa12.82□□□□□ -0.36
SSRP1-204ENST00000529002 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
SSRP1-204ENST00000529002 ATP5IP56385 69 aaPredicted RBP12.81□□□□□ -0.36
SSRP1-204ENST00000529002 RAB11AP62491 216 aa12.81□□□□□ -0.36
SSRP1-204ENST00000529002 CCDC190Q86UF4 302 aa12.81□□□□□ -0.36
SSRP1-204ENST00000529002 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
SSRP1-204ENST00000529002 TMEM70Q9BUB7 260 aa12.81□□□□□ -0.36
SSRP1-204ENST00000529002 TRGV2A0A075B6R0 118 aa12.8□□□□□ -0.36
SSRP1-204ENST00000529002 IGLV5-52A0A0A0MRZ9 124 aa12.8□□□□□ -0.36
SSRP1-204ENST00000529002 TRAV12-3A0A0B4J271 114 aa12.8□□□□□ -0.36
SSRP1-204ENST00000529002 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
SSRP1-204ENST00000529002 RPL7P18124 248 aaKnown RBP12.8□□□□□ -0.36
SSRP1-204ENST00000529002 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
SSRP1-204ENST00000529002 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
SSRP1-204ENST00000529002 IGHV3-53P01767 116 aa12.79□□□□□ -0.36
SSRP1-204ENST00000529002 AKR1C1Q04828 323 aa12.79□□□□□ -0.36
SSRP1-204ENST00000529002 SURF2Q15527 256 aaPredicted RBP12.79□□□□□ -0.36
SSRP1-204ENST00000529002 SERTAD4-AS1Q5TG53 156 aa12.79□□□□□ -0.36
SSRP1-204ENST00000529002 LYPD5Q6UWN5 251 aa12.79□□□□□ -0.36
SSRP1-204ENST00000529002 C20orf144Q9BQM9 153 aa12.79□□□□□ -0.36
SSRP1-204ENST00000529002 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
SSRP1-204ENST00000529002 HIGD1AQ9Y241 93 aa12.79□□□□□ -0.36
SSRP1-204ENST00000529002 A0A087X0K7 114 aa12.78□□□□□ -0.36
SSRP1-204ENST00000529002 LINC00854A0A1B0GVQ3 168 aa12.78□□□□□ -0.36
SSRP1-204ENST00000529002 H3BTX0 84 aa12.78□□□□□ -0.36
SSRP1-204ENST00000529002 PAX4O43316 350 aa12.78□□□□□ -0.36
SSRP1-204ENST00000529002 DAZ2Q13117 558 aaKnown RBP12.78□□□□□ -0.36
SSRP1-204ENST00000529002 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
SSRP1-204ENST00000529002 SYT8Q8NBV8 401 aa12.78□□□□□ -0.36
SSRP1-204ENST00000529002 Q9H521 79 aa12.78□□□□□ -0.36
SSRP1-204ENST00000529002 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
SSRP1-204ENST00000529002 TRGV1A0A0A0MS02 117 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 DISC1C4P0D8 188 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 MRPS12O15235 138 aaKnown RBP12.77□□□□□ -0.37
SSRP1-204ENST00000529002 PITX3O75364 302 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 OR5G3P0C626 314 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 AKR1C4P17516 323 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 RAP2BP61225 183 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 OR51S1Q8NGJ8 323 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 FUT9Q9Y231 359 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 KCNIP3Q9Y2W7 256 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 LY96Q9Y6Y9 160 aa12.77□□□□□ -0.37
SSRP1-204ENST00000529002 PMS2P5A8MQ11 134 aa12.76□□□□□ -0.37
SSRP1-204ENST00000529002 NPIPB6E9PJ23 425 aa12.76□□□□□ -0.37
SSRP1-204ENST00000529002 ZNF324O75467 553 aaPredicted RBP12.76□□□□□ -0.37
SSRP1-204ENST00000529002 CYP2G1PQ6ZSU1 146 aa12.76□□□□□ -0.37
SSRP1-204ENST00000529002 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
SSRP1-204ENST00000529002 LINC00467Q9BRT7 94 aa12.76□□□□□ -0.37
SSRP1-204ENST00000529002 PLA2G2DQ9UNK4 145 aa12.76□□□□□ -0.37
SSRP1-204ENST00000529002 H3BP45 60 aa12.75□□□□□ -0.37
SSRP1-204ENST00000529002 WRBO00258 174 aa12.75□□□□□ -0.37
SSRP1-204ENST00000529002 HYPMO75409 117 aa12.75□□□□□ -0.37
SSRP1-204ENST00000529002 IL5P05113 134 aa12.75□□□□□ -0.37
SSRP1-204ENST00000529002 PATE2Q6UY27 113 aa12.75□□□□□ -0.37
SSRP1-204ENST00000529002 ACOT7LQ6ZUV0 252 aa12.75□□□□□ -0.37
SSRP1-204ENST00000529002 LINC00528Q8N1L1 170 aa12.75□□□□□ -0.37
SSRP1-204ENST00000529002 ZBTB8BQ8NAP8 495 aaPredicted RBP12.75□□□□□ -0.37
SSRP1-204ENST00000529002 ZNF331Q9NQX6 463 aaPredicted RBP12.75□□□□□ -0.37
SSRP1-204ENST00000529002 KLF12Q9Y4X4 402 aa12.75□□□□□ -0.37
SSRP1-204ENST00000529002 SMCO3A2RU48 225 aa12.74□□□□□ -0.37
SSRP1-204ENST00000529002 LRCOL1A6NCL2 159 aa12.74□□□□□ -0.37
SSRP1-204ENST00000529002 SLC17A3O00476 420 aa12.74□□□□□ -0.37
SSRP1-204ENST00000529002 PRAF2O60831 178 aa12.74□□□□□ -0.37
SSRP1-204ENST00000529002 PLA2G1BP04054 148 aaKnown RBP12.74□□□□□ -0.37
SSRP1-204ENST00000529002 LINC00869P0C866 280 aa12.74□□□□□ -0.37
SSRP1-204ENST00000529002 CT45A10P0DMU9 189 aa12.74□□□□□ -0.37
SSRP1-204ENST00000529002 MZT2AQ6P582 158 aa12.74□□□□□ -0.37
SSRP1-204ENST00000529002 ZNF431Q8TF32 576 aaPredicted RBP12.74□□□□□ -0.37
SSRP1-204ENST00000529002 FUNDC2Q9BWH2 189 aa12.74□□□□□ -0.37
SSRP1-204ENST00000529002 TRAV9-2A0A087WT02 112 aa12.73□□□□□ -0.37
SSRP1-204ENST00000529002 S100A7P31151 101 aa12.73□□□□□ -0.37
SSRP1-204ENST00000529002 SPANXN5Q5MJ07 72 aa12.73□□□□□ -0.37
SSRP1-204ENST00000529002 CLVS1Q8IUQ0 354 aaPredicted RBP12.73□□□□□ -0.37
SSRP1-204ENST00000529002 DEFB104AQ8WTQ1 72 aa12.73□□□□□ -0.37
SSRP1-204ENST00000529002 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
SSRP1-204ENST00000529002 MIXL1Q9H2W2 232 aa12.73□□□□□ -0.37
SSRP1-204ENST00000529002 AKAIN1P0CW23 69 aa12.72□□□□□ -0.37
SSRP1-204ENST00000529002 ANXA7P20073 488 aaKnown RBP12.72□□□□□ -0.37
SSRP1-204ENST00000529002 PYGO2Q9BRQ0 406 aa12.72□□□□□ -0.37
SSRP1-204ENST00000529002 CRYBA4P53673 196 aa12.71□□□□□ -0.37
SSRP1-204ENST00000529002 PLP1P60201 277 aa12.71□□□□□ -0.37
SSRP1-204ENST00000529002 TEPPQ6URK8 271 aa12.71□□□□□ -0.37
SSRP1-204ENST00000529002 PRRT1Q99946 306 aa12.71□□□□□ -0.37
SSRP1-204ENST00000529002 ARL6Q9H0F7 186 aa12.71□□□□□ -0.37
SSRP1-204ENST00000529002 MRPL16Q9NX20 251 aaKnown RBP12.71□□□□□ -0.37
SSRP1-204ENST00000529002 FAT3Q8TDW7 4589 aa12.71□□□□□ -0.38
SSRP1-204ENST00000529002 SYNGR2O43760 224 aa12.7□□□□□ -0.38
SSRP1-204ENST00000529002 LCN15Q6UWW0 184 aa12.7□□□□□ -0.38
SSRP1-204ENST00000529002 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
SSRP1-204ENST00000529002 NAA50Q9GZZ1 169 aaKnown RBP12.7□□□□□ -0.38
SSRP1-204ENST00000529002 SPINK4O60575 86 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 CCNKO75909 580 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 CRYGDP07320 174 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 EVI2AP22794 236 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 LEPP41159 167 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 SSBP1Q04837 148 aaKnown RBP12.69□□□□□ -0.38
SSRP1-204ENST00000529002 FHL2Q14192 279 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms