RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 HMGB3O15347 200 aaKnown RBP9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 IFNA1P01562 189 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 BCL2P10415 239 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 S100A7P31151 101 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 CDC34P49427 236 aaPredicted RBP9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 FAM74A3Q4VXF1 159 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 FAM90A2PQ658T7 463 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 LCN15Q6UWW0 184 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 TCF24Q7RTU0 167 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 DYNLRB2Q8TF09 96 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 GRAMD2BQ96HH9 432 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 MAP1LC3BQ9GZQ8 125 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 TUBA4BQ9H853 241 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 VAX2Q9UIW0 290 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SMAD5-AS1Q9Y6J3 95 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 IZUMO1RA6ND01 250 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 MRPS12O15235 138 aaKnown RBP9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 IGLV1-51P01701 117 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 BMI1P35226 326 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 RHEBQ15382 184 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 HAGHQ16775 308 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 CD300EQ496F6 205 aaPredicted RBP9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 C9orf66Q5T8R8 295 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 C17orf77Q96MU5 243 aa9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 MCRIP2Q9BUT9 160 aaKnown RBP9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
TRAF3IP2-211ENST00000528599 A0A1B0GV50 99 aa9.15□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SNRPCP09234 159 aaKnown RBP9.15□□□□□ -0.94
TRAF3IP2-211ENST00000528599 GP9P14770 177 aa9.15□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SIGLEC15Q6ZMC9 328 aa9.15□□□□□ -0.94
TRAF3IP2-211ENST00000528599 TMEM61Q8N0U2 210 aa9.15□□□□□ -0.94
TRAF3IP2-211ENST00000528599 ZNF503Q96F45 646 aa9.15□□□□□ -0.94
TRAF3IP2-211ENST00000528599 SMCO4Q9NRQ5 59 aa9.15□□□□□ -0.94
TRAF3IP2-211ENST00000528599 GNG13Q9P2W3 67 aa9.15□□□□□ -0.94
TRAF3IP2-211ENST00000528599 IGKV3-7A0A075B6H7 116 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TSPAN4O14817 238 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 STAG3L2P0CL84 134 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 STAG3L3P0CL85 134 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 PYYP10082 97 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 RPL7P18124 248 aaKnown RBP9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 PSMB3P49720 205 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 INSL3P51460 131 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 BPIFA4PQ86YQ2 179 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 RXFP4Q8TDU9 374 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 GPR82Q96P67 336 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TMEM14CQ9P0S9 112 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 RNF24Q9Y225 148 aa9.14□□□□□ -0.95
TRAF3IP2-211ENST00000528599 C7orf77A4D0Y5 90 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 HELTA6NFD8 242 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 H3BQ15 152 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 WIPF1O43516 503 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 OR7C2O60412 319 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 GALR1P47211 349 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TAS2R45P59539 299 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 RPL11P62913 178 aaKnown RBP9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 OXLD1Q5BKU9 147 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 OR51M1Q9H341 326 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 MANBALQ9NQG1 85 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 ZNF785A8K8V0 405 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 H3BTX0 84 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 OR10J4P0C629 311 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 ARL14EPLP0DKL9 152 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 IGLC2P0DOY2 106 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 FGF8P55075 233 aaPredicted RBP9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 RBPMS2Q6ZRY4 209 aaKnown RBP9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 GBGT1Q8N5D6 347 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 FXYD5Q96DB9 178 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 PAXXQ9BUH6 204 aa9.13□□□□□ -0.95
TRAF3IP2-211ENST00000528599 DNAH3Q8TD57 4116 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TRAV25A0A0B4J276 109 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TMEM250H0YL14 139 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TMEM88Q6PEY1 159 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 PQLC2Q6ZP29 291 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 CYB561D1Q8N8Q1 229 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 STXBP6Q8NFX7 210 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 OR2K2Q8NGT1 345 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TXNDC17Q9BRA2 123 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 MS4A6AQ9H2W1 248 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 ZNF586Q9NXT0 402 aa9.12□□□□□ -0.95
TRAF3IP2-211ENST00000528599 A0A087WWC5 75 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 A0A087X0K7 114 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 B4DEV8 164 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 G3V4G9 280 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 CXorf1O96002 111 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 HIST1H1EP10412 219 aaKnown RBP9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 ATF4P18848 351 aaPredicted RBP9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 GCHFRP30047 84 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TFPI2P48307 235 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 MEF2BQ02080 365 aaPredicted RBP9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 PNRC1Q12796 327 aaPredicted RBP9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 WFDC3Q8IUB2 231 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 CBLN2Q8IUK8 224 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 TVP23CQ96ET8 276 aa9.11□□□□□ -0.95
TRAF3IP2-211ENST00000528599 NIPSNAP3BQ9BS92 247 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms