RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 SAMD10Q9BYL1 202 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 TP53TG3Q9ULZ0 132 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 H3BRN7 92 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 IBA57Q5T440 356 aaKnown RBP12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 ZNF329Q86UD4 541 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 BPIFA4PQ86YQ2 179 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 KRTAP1-3Q8IUG1 177 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 NAT8BQ9UHF3 227 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 RNF24Q9Y225 148 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 NAV2Q8IVL1 2488 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 MAP1AP78559 2803 aaPredicted RBP12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 TRBV7-1A0A0A6YYK4 115 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 CLEC3BP05452 202 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 GPR183P32249 361 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 OR5I1Q13606 314 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 C19orf54Q5BKX5 351 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 SIGLECL1Q8N7X8 197 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 SMIM12Q96EX1 92 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 ZNF586Q9NXT0 402 aa12.63□□□□□ -0.39
SNRNP35-204ENST00000527158 IZUMO1RA6ND01 250 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 HIST1H1EP10412 219 aaKnown RBP12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 BLCAPP62952 87 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 ATP5G2Q06055 141 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 TOMM20LQ6UXN7 152 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 TMEM136Q6ZRR5 245 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 Q6ZWC4 215 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 FAM223BA6NKX1 122 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 S100A7P31151 101 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 FAM223AQ8IWN6 122 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 OR4F17Q8NGA8 305 aa12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 WIPF2Q8TF74 440 aaPredicted RBP12.62□□□□□ -0.39
SNRNP35-204ENST00000527158 A0A1B0GUS0 222 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 PGPA6NDG6 321 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 FSHBP01225 129 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 IGLV2-8P01709 118 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 IGHV4-59P01825 116 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 MYCNOSP40205 109 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 LINC00310P59036 64 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 TMEM190Q8WZ59 177 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 ABCA12Q86UK0 2595 aa12.61□□□□□ -0.39
SNRNP35-204ENST00000527158 PEX7O00628 323 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 RAB4AP20338 218 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 CLEC19AQ6UXS0 136 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 C9orf139Q6ZV77 190 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 MIEN1Q9BRT3 115 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 TENM4Q6N022 2769 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 BMPR1BO00238 502 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 TRGV3P03979 118 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 SLC25A5P05141 298 aaKnown RBP12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 GPX1P07203 203 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 OR4B1Q8NGF8 309 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 KCNS1Q96KK3 526 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 CCDC140Q96MF4 163 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 ATP6V0BQ99437 205 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 VAMP8Q9BV40 100 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 RNASE7Q9H1E1 156 aaKnown RBP12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 GNB4Q9HAV0 340 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 ZNF331Q9NQX6 463 aaPredicted RBP12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 RABAC1Q9UI14 185 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 EPDR1Q9UM22 224 aa12.6□□□□□ -0.39
SNRNP35-204ENST00000527158 DOPEY2Q9Y3R5 2298 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 H3BUA1 57 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 MGST1P10620 155 aaKnown RBP12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 Q9H3A6 140 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 H3BTX0 84 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 TCAPO15273 167 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 BRI3O95415 125 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 C5orf17Q8NAS9 161 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 GRAMD2BQ96HH9 432 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 SNHG12Q9BXW3 62 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 CSMD1Q96PZ7 3565 aa12.59□□□□□ -0.39
SNRNP35-204ENST00000527158 PPIFP30405 207 aaKnown RBP12.58□□□□□ -0.4
SNRNP35-204ENST00000527158 WFDC11Q8NEX6 87 aa12.58□□□□□ -0.4
SNRNP35-204ENST00000527158 OTORQ9NRC9 128 aa12.58□□□□□ -0.4
SNRNP35-204ENST00000527158 SERTAD4Q9NUC0 356 aa12.58□□□□□ -0.4
SNRNP35-204ENST00000527158 CR1P17927 2039 aa12.58□□□□□ -0.4
SNRNP35-204ENST00000527158 IGHV3-35A0A0C4DH35 117 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 EREGO14944 169 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 APCSP02743 223 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 RELQ04864 619 aaPredicted RBP12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 Q6YL49 198 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 TRBV19A0A075B6N1 114 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 IGLC2P0DOY2 106 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 GNG5P63218 68 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 Q6ZS46 218 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 USMG5Q96IX5 58 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 LINC00479Q96M42 142 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 NEU1Q99519 415 aa12.57□□□□□ -0.4
SNRNP35-204ENST00000527158 ZNF253O75346 499 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 RPL7P18124 248 aaKnown RBP12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 UBE2G1P62253 170 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 ATP5L2Q7Z4Y8 100 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 LYPD1Q8N2G4 141 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 RPH3ALQ9UNE2 315 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 APCP25054 2843 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 FAM162BQ5T6X4 162 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms