RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 HIST1H1EP10412 219 aaKnown RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 CD79AP11912 226 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PDE6GP18545 87 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 SPRR2DP22532 72 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 CASQ1P31415 396 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 TCL1AP56279 114 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 FXYD4P59646 89 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 SPCS3P61009 180 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PSME3P61289 254 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 SKP1P63208 163 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 ACOT6Q3I5F7 207 aaPredicted RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 KRTAP19-7Q3SYF9 63 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 GLYATL3Q5SZD4 288 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 ARPINQ7Z6K5 226 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 Q86TA4 180 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PDZD9Q8IXQ8 264 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 ANKRD29Q8N6D5 301 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 GDPD1Q8N9F7 314 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 OR5D14Q8NGL3 314 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 OR2T35Q8NGX2 323 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 OR10AG1Q8NH19 301 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 STAG3L4Q8TBR4 150 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 POP5Q969H6 163 aaKnown RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PTH2Q96A98 100 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 RMND5BQ96G75 393 aaPredicted RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 C2orf50Q96LR7 162 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 GGACTQ9BVM4 153 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 C6orf62Q9GZU0 229 aaPredicted RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PBOV1Q9GZY1 135 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 LPAR5Q9H1C0 372 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 FAM96AQ9H5X1 160 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 HSPB8Q9UJY1 196 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 OR52A1Q9UKL2 312 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 NOSIPQ9Y314 301 aaKnown RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PPRC1Q5VV67 1664 aaKnown RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 FMN1Q68DA7 1419 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PKD1P98161 4303 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 EP300Q09472 2414 aaPredicted RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 SSC5DA1L4H1 1573 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 CASZ1Q86V15 1759 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 CHD8Q9HCK8 2581 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 AKAP9Q99996 3911 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 STARD9Q9P2P6 4700 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 TRAV23DV6A0A075B6W5 121 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 A0A096LNT2 108 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 TRAV4A0A0B4J268 109 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 A0A0J9YY99 117 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 NBDYA0A0U1RRE5 68 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 hADV38S2A0JD32 116 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 C9orf170A2RU37 121 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 C1orf196B1AJZ1 125 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 PIRO00625 290 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 SLC16A4O15374 487 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 TGOLN2O43493 480 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 NDUFB3O43676 98 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 DCTN3O75935 186 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 OR7C1O76099 320 aaPredicted RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 APOEP02649 317 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 SERPINE1P05121 402 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 SERPINA6P08185 405 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 OCM2P0CE71 109 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 CYBAP13498 195 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 S100A4P26447 101 aaKnown RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 ANP32AP39687 249 aaKnown RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 AP2S1P53680 142 aaPredicted RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 AP3S2P59780 193 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 RANP62826 216 aaKnown RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 EIF3IQ13347 325 aaKnown RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 SPINK13Q1W4C9 94 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 IAH1Q2TAA2 248 aaPredicted RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 OCIAD2Q56VL3 154 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 OGFRL1Q5TC84 451 aaPredicted RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 SPOPLQ6IQ16 392 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 C22orf39Q6P5X5 142 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 Q6Q795 121 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 FAM151BQ6UXP7 276 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 VMO1Q7Z5L0 202 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 DEFB132Q7Z7B7 95 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 TEN1Q86WV5 123 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 FAM9CQ8IZT9 166 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 C10orf111Q8N326 155 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 CANT1Q8WVQ1 401 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 PLEKHB2Q96CS7 222 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 MUCL1Q96DR8 90 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 CHMP4BQ9H444 224 aaKnown RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 FGFR1OP2Q9NVK5 253 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 RNF11Q9Y3C5 154 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 LSM5Q9Y4Y9 91 aaKnown RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 ASB4Q9Y574 426 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 LRP5O75197 1615 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 CCDC144AA2RUR9 1427 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 CNOT1A5YKK6 2376 aaKnown RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 CD109Q6YHK3 1445 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 MUC22E2RYF6 1773 aaPredicted RBP-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 KDM3BQ7LBC6 1761 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 RTL1A6NKG5 1358 aa-0.32□□□□□ -2.46
CSDE1-210ENST00000525878 HERC2O95714 4834 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 NRXN2Q9P2S2 1712 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 NHSL1Q5SYE7 1610 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 322.8 ms