RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, human

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-213	ENST00000524516	RAB6A	P20340	208 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	AKR1C2	P52895	323 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	ANXA2R	Q3ZCQ2	193 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	NOXA1	Q86UR1	476 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	LYPD6B	Q8NI32	183 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516		Q8TAT8	98 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	SPACA4	Q8TDM5	124 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	CHAC2	Q8WUX2	184 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	APH1B	Q8WW43	257 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	UBE2W	Q96B02	151 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	TMEM80	Q96HE8	168 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	ARPC5L	Q9BPX5	153 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	HEYL	Q9NQ87	328 aa	Predicted RBP	4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	PLAC8	Q9NZF1	115 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	URGCP-MRPS24	S4R325	110 aa		4.98	□□□□□ -1.61
PUM1-213	ENST00000524516	SSX5	O60225	188 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	IGKV1-39	P01597	117 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	HLA-DQA1	P01909	254 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	IGKV1D-39	P04432	117 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	OR10J4	P0C629	311 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	SEC11B	P0C7V7	166 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	S100G	P29377	79 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	TAS2R20	P59543	309 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	KLF9	Q13886	244 aa	Predicted RBP	4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	PHLDA2	Q53GA4	152 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	C2orf83	Q53S99	150 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	BPIFC	Q8NFQ6	507 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	OR10P1	Q8NGE3	313 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	OR4D5	Q8NGN0	318 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	OR10G4	Q8NGN3	311 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	ZNF431	Q8TF32	576 aa	Predicted RBP	4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	CDIP1	Q9H305	208 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	OR51M1	Q9H341	326 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	SSR3	Q9UNL2	185 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516		V9GY05	133 aa		4.97	□□□□□ -1.61
PUM1-213	ENST00000524516	C7orf71	A4D174	169 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	EFCAB10	A6NFE3	127 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	GABARAP	H6UMI1	98 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	GPR31	O00270	319 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	EI24	O14681	340 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	CASQ2	O14958	399 aa	Predicted RBP	4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	GABARAP	O95166	117 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	FCGR1A	P12314	374 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	RFX2	P48378	723 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	MEF2D	Q14814	521 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	TMEM183B	Q1AE95	376 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	TRIM16L	Q309B1	348 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516		Q6ZQT7	251 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	TMEM183A	Q8IXX5	376 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	CCDC71L	Q8N9Z2	235 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	C1orf43	Q9BWL3	253 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	GTSF1L	Q9H1H1	148 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	KLK12	Q9UKR0	248 aa		4.96	□□□□□ -1.62
PUM1-213	ENST00000524516	IGHV3-64	A0A075B6Q5	118 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	IGHV1OR15-1	A0A075B7D0	117 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	IGHV3-16	A0A0C4DH30	117 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	RGS13	O14921	159 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	ARL6IP5	O75915	188 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	HSMCR30	P0CW71	290 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	CRYGA	P11844	174 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	S100A7	P31151	101 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	CCR6	P51684	374 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	TEPP	Q6URK8	271 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	LINC00479	Q96M42	142 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	DIABLO	Q9NR28	239 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	EHF	Q9NZC4	300 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	TP53TG3	Q9ULZ0	132 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	AP4S1	Q9Y587	144 aa		4.95	□□□□□ -1.62
PUM1-213	ENST00000524516	TRAV4	A0A0B4J268	109 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	LINC00854	A0A1B0GVQ3	168 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	MPDU1	O75352	247 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	WBP4	O75554	376 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	SLC25A5	P05141	298 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	CFC1B	P0CG36	223 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	CT45A10	P0DMU9	189 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	ORM2	P19652	201 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	CALB2	P22676	271 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	POLR2G	P62487	172 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	SPCS2	Q15005	226 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516		Q6ZRP5	223 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	TBC1D26	Q86UD7	250 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	FAM219A	Q8IW50	185 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	CCDC197	Q8NCU1	140 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	OR4C5	Q8NGB2	326 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	RNASE11	Q8TAA1	199 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	SLC25A38	Q96DW6	304 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	PRADC1	Q9BSG0	188 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	TMEM147	Q9BVK8	224 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	TMEM222	Q9H0R3	208 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	SH3BGRL3	Q9H299	93 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	SLC45A2	Q9UMX9	530 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	POMP	Q9Y244	141 aa		4.94	□□□□□ -1.62
PUM1-213	ENST00000524516	IGKV1D-37	A0A075B6S9	117 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	CEBPZOS	A8MTT3	80 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	RPL7	P18124	248 aa	Known RBP	4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	PI3	P19957	117 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	SPCS3	P61009	180 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516		Q0VG73	95 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms