RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 RNASE8Q8TDE3 154 aaKnown RBP17.96■□□□□ 0.47
PVT1-219ENST00000523427 TMEM263Q8WUH6 116 aaKnown RBP17.96■□□□□ 0.47
PVT1-219ENST00000523427 RPUSD4Q96CM3 377 aaKnown RBP17.96■□□□□ 0.47
PVT1-219ENST00000523427 RABL2AQ9UBK7 228 aaPredicted RBP17.96■□□□□ 0.47
PVT1-219ENST00000523427 RSL24D1Q9UHA3 163 aaKnown RBP17.96■□□□□ 0.47
PVT1-219ENST00000523427 RABL2BQ9UNT1 228 aa17.96■□□□□ 0.47
PVT1-219ENST00000523427 ZNF701M0R085 212 aaPredicted RBP17.95■□□□□ 0.46
PVT1-219ENST00000523427 LINC00869P0C866 280 aa17.95■□□□□ 0.46
PVT1-219ENST00000523427 ANXA7P20073 488 aaKnown RBP17.95■□□□□ 0.46
PVT1-219ENST00000523427 TMEM128Q5BJH2 165 aa17.95■□□□□ 0.46
PVT1-219ENST00000523427 HERC1Q15751 4861 aa17.95■□□□□ 0.46
PVT1-219ENST00000523427 SLC25A6P12236 298 aa17.94■□□□□ 0.46
PVT1-219ENST00000523427 HOXA5P20719 270 aa17.94■□□□□ 0.46
PVT1-219ENST00000523427 CCDC28AQ8IWP9 274 aa17.94■□□□□ 0.46
PVT1-219ENST00000523427 H7BYZ3 331 aa17.93■□□□□ 0.46
PVT1-219ENST00000523427 J3KRW8 73 aa17.93■□□□□ 0.46
PVT1-219ENST00000523427 FUSP35637 526 aaKnown RBP eCLIP17.93■□□□□ 0.46
PVT1-219ENST00000523427 ARL6Q9H0F7 186 aa17.93■□□□□ 0.46
PVT1-219ENST00000523427 FABP12A6NFH5 140 aa17.92■□□□□ 0.46
PVT1-219ENST00000523427 EPM2AB3EWF7 344 aa17.92■□□□□ 0.46
PVT1-219ENST00000523427 ADAP1O75689 374 aa17.92■□□□□ 0.46
PVT1-219ENST00000523427 RRAS2P62070 204 aaPredicted RBP17.92■□□□□ 0.46
PVT1-219ENST00000523427 LRTM2Q8N967 370 aa17.92■□□□□ 0.46
PVT1-219ENST00000523427 A0A087X0K7 114 aa17.91■□□□□ 0.46
PVT1-219ENST00000523427 PMS2P5A8MQ11 134 aa17.91■□□□□ 0.46
PVT1-219ENST00000523427 RLN2P04090 185 aa17.91■□□□□ 0.46
PVT1-219ENST00000523427 FAUP35544 74 aaKnown RBP17.91■□□□□ 0.46
PVT1-219ENST00000523427 CCDC190Q86UF4 302 aa17.91■□□□□ 0.46
PVT1-219ENST00000523427 H3BTX0 84 aa17.9■□□□□ 0.46
PVT1-219ENST00000523427 BTF3P20290 206 aaKnown RBP17.9■□□□□ 0.46
PVT1-219ENST00000523427 POLR2GP62487 172 aaKnown RBP eCLIP17.9■□□□□ 0.46
PVT1-219ENST00000523427 PPP1R1AQ13522 171 aa17.9■□□□□ 0.46
PVT1-219ENST00000523427 UPK3BQ9BT76 320 aa17.9■□□□□ 0.46
PVT1-219ENST00000523427 PSENENQ9NZ42 101 aa17.9■□□□□ 0.46
PVT1-219ENST00000523427 MRPS16Q9Y3D3 137 aaKnown RBP17.9■□□□□ 0.46
PVT1-219ENST00000523427 SNURFLB1AK76 121 aa17.89■□□□□ 0.45
PVT1-219ENST00000523427 SFT2D2O95562 160 aa17.89■□□□□ 0.45
PVT1-219ENST00000523427 GFI1BQ5VTD9 330 aa17.89■□□□□ 0.45
PVT1-219ENST00000523427 ZNF503Q96F45 646 aa17.89■□□□□ 0.45
PVT1-219ENST00000523427 A0A1W2PPQ1 181 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 CCNKO75909 580 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 TNFSF8P32971 234 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 LINC00315P59091 139 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 PATE2Q6UY27 113 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 MCFD2Q8NI22 146 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 DYNC2LI1Q8TCX1 351 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 ARV1Q9H2C2 271 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 TMPRSS5Q9H3S3 457 aa17.88■□□□□ 0.45
PVT1-219ENST00000523427 CCDC59Q9P031 241 aaKnown RBP17.88■□□□□ 0.45
PVT1-219ENST00000523427 DMBT1Q9UGM3 2413 aaPredicted RBP17.87■□□□□ 0.45
PVT1-219ENST00000523427 PRAC2D3DTV9 90 aa17.87■□□□□ 0.45
PVT1-219ENST00000523427 PLP1P60201 277 aa17.87■□□□□ 0.45
PVT1-219ENST00000523427 SELENOTP62341 195 aa17.87■□□□□ 0.45
PVT1-219ENST00000523427 LINC00612Q8N6U2 182 aa17.87■□□□□ 0.45
PVT1-219ENST00000523427 INAFM2P0DMQ5 153 aa17.86■□□□□ 0.45
PVT1-219ENST00000523427 SLC38A11Q08AI6 406 aa17.86■□□□□ 0.45
PVT1-219ENST00000523427 S100A7AQ86SG5 101 aa17.86■□□□□ 0.45
PVT1-219ENST00000523427 TOMM5Q8N4H5 51 aa17.86■□□□□ 0.45
PVT1-219ENST00000523427 MRPS12O15235 138 aaKnown RBP17.85■□□□□ 0.45
PVT1-219ENST00000523427 SSSCA1O60232 199 aa17.85■□□□□ 0.45
PVT1-219ENST00000523427 SOSTQ9BQB4 213 aa17.85■□□□□ 0.45
PVT1-219ENST00000523427 C20orf144Q9BQM9 153 aa17.85■□□□□ 0.45
PVT1-219ENST00000523427 ZNF331Q9NQX6 463 aaPredicted RBP17.85■□□□□ 0.45
PVT1-219ENST00000523427 TRAV12-3A0A0B4J271 114 aa17.84■□□□□ 0.45
PVT1-219ENST00000523427 METTL15P1P0C7V9 234 aa17.84■□□□□ 0.45
PVT1-219ENST00000523427 PYDC2Q56P42 97 aa17.84■□□□□ 0.45
PVT1-219ENST00000523427 LCN15Q6UWW0 184 aa17.84■□□□□ 0.45
PVT1-219ENST00000523427 Q6ZTI0 123 aa17.84■□□□□ 0.45
PVT1-219ENST00000523427 MRPS26Q9BYN8 205 aaKnown RBP17.84■□□□□ 0.45
PVT1-219ENST00000523427 AP3S2P59780 193 aa17.83■□□□□ 0.44
PVT1-219ENST00000523427 ID3Q02535 119 aa17.83■□□□□ 0.44
PVT1-219ENST00000523427 LINC00305Q7Z4B0 112 aa17.83■□□□□ 0.44
PVT1-219ENST00000523427 SLC50A1Q9BRV3 221 aa17.83■□□□□ 0.44
PVT1-219ENST00000523427 SLC17A3O00476 420 aa17.82■□□□□ 0.44
PVT1-219ENST00000523427 TRIM63Q969Q1 353 aa17.82■□□□□ 0.44
PVT1-219ENST00000523427 SLC25A21Q9BQT8 299 aaPredicted RBP17.82■□□□□ 0.44
PVT1-219ENST00000523427 NPVFQ9HCQ7 196 aa17.82■□□□□ 0.44
PVT1-219ENST00000523427 PTTG2Q9NZH5 202 aa17.82■□□□□ 0.44
PVT1-219ENST00000523427 TRGV2A0A075B6R0 118 aa17.81■□□□□ 0.44
PVT1-219ENST00000523427 A0A096LPF7 62 aa17.81■□□□□ 0.44
PVT1-219ENST00000523427 H3BNG1 76 aa17.81■□□□□ 0.44
PVT1-219ENST00000523427 GOSR2O14653 212 aa17.81■□□□□ 0.44
PVT1-219ENST00000523427 RAB2BQ8WUD1 216 aa17.81■□□□□ 0.44
PVT1-219ENST00000523427 VSIG2Q96IQ7 327 aa17.81■□□□□ 0.44
PVT1-219ENST00000523427 SLIRPQ9GZT3 109 aaKnown RBP17.81■□□□□ 0.44
PVT1-219ENST00000523427 MGAT4CQ9UBM8 478 aa17.81■□□□□ 0.44
PVT1-219ENST00000523427 SCGB1D2O95969 90 aa17.8■□□□□ 0.44
PVT1-219ENST00000523427 CXCL2P19875 107 aa17.8■□□□□ 0.44
PVT1-219ENST00000523427 TEPPQ6URK8 271 aa17.8■□□□□ 0.44
PVT1-219ENST00000523427 Q6ZRN7 208 aaPredicted RBP17.8■□□□□ 0.44
PVT1-219ENST00000523427 PGPEP1Q9NXJ5 209 aa17.8■□□□□ 0.44
PVT1-219ENST00000523427 RNF24Q9Y225 148 aa17.8■□□□□ 0.44
PVT1-219ENST00000523427 TNFRSF18Q9Y5U5 241 aa17.8■□□□□ 0.44
PVT1-219ENST00000523427 LINC00854A0A1B0GVQ3 168 aa17.79■□□□□ 0.44
PVT1-219ENST00000523427 EREGO14944 169 aa17.79■□□□□ 0.44
PVT1-219ENST00000523427 CT45A10P0DMU9 189 aa17.79■□□□□ 0.44
PVT1-219ENST00000523427 BPIFA4PQ86YQ2 179 aa17.79■□□□□ 0.44
PVT1-219ENST00000523427 OR10P1Q8NGE3 313 aa17.79■□□□□ 0.44
PVT1-219ENST00000523427 SMIM8Q96KF7 97 aa17.79■□□□□ 0.44
PVT1-219ENST00000523427 SIVA1O15304 175 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms