RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 Q96MF0 132 aa10.46□□□□□ -0.73
PCDHGB1-201ENST00000523390 TRAV21A0A0B4J279 112 aa10.46□□□□□ -0.73
PCDHGB1-201ENST00000523390 HINT1P49773 126 aaPredicted RBP10.46□□□□□ -0.73
PCDHGB1-201ENST00000523390 NSUN5P1Q3KNT7 163 aa10.46□□□□□ -0.73
PCDHGB1-201ENST00000523390 C22orf34Q6ZV56 151 aa10.46□□□□□ -0.73
PCDHGB1-201ENST00000523390 SHANK2-AS3Q9BTD1 123 aa10.46□□□□□ -0.73
PCDHGB1-201ENST00000523390 PRRC2CQ9Y520 2896 aaKnown RBP10.46□□□□□ -0.74
PCDHGB1-201ENST00000523390 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.74
PCDHGB1-201ENST00000523390 CHD3Q12873 2000 aaKnown RBP10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 RPLP1P05386 114 aaKnown RBP10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 FAM110DQ8TAY7 271 aaPredicted RBP10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 LRP4O75096 1905 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 A0A1B0GW15 77 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 H3BVH4 76 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 ZNF324O75467 553 aaPredicted RBP10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 LCN12Q6JVE5 192 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 USMG5Q96IX5 58 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 EMP1P54849 157 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 FOXL1Q12952 345 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 ZNF414Q96IQ9 312 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 JMJD8Q96S16 334 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 RHPN1-AS1Q9BWJ2 59 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 NRN1Q9NPD7 142 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 UQCR10Q9UDW1 63 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 PAX1P15863 534 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 GUSBP1Q15486 140 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 ZNF124Q15973 351 aa10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 FNDC4Q9H6D8 234 aaPredicted RBP10.45□□□□□ -0.74
PCDHGB1-201ENST00000523390 ARHGAP21Q5T5U3 1957 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 FAM181BA6NEQ2 426 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 OVOL1O14753 267 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 JOSD1Q15040 202 aaPredicted RBP10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 CBY1Q9Y3M2 126 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 SETD2Q9BYW2 2564 aaPredicted RBP10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 FAM120AOSQ5T036 256 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 PMCHL2Q9BQD1 86 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 NDUFAF3Q9BU61 184 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 GNB1LQ9BYB4 327 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 ZNF256Q9Y2P7 627 aaPredicted RBP10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 IGKV3OR2-268A0A0C4DH90 116 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 TCF21O43680 179 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 FCN3O75636 299 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 GATA3P23771 443 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 CR1LQ2VPA4 569 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 SLC25A34Q6PIV7 304 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 NCKAP5O14513 1909 aa10.44□□□□□ -0.74
PCDHGB1-201ENST00000523390 IGHV4-61A0A0C4DH41 118 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 C9orf139Q6ZV77 190 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 NRGNQ92686 78 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 TNRC6AQ8NDV7 1962 aaKnown RBP10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 DUSP14O95147 198 aaKnown RBP10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 NUP210LQ5VU65 1888 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 J3QKU1 62 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 ZNF138P52744 262 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 LCNL1Q6ZST4 164 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 STHQ8IWL8 128 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 KLHL30-AS1Q8NEE0 82 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 TMEM160Q9NX00 188 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 FAM223BA6NKX1 122 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 CRIP3Q6Q6R5 217 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 FAM223AQ8IWN6 122 aa10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
PCDHGB1-201ENST00000523390 UBE2L6O14933 153 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 ST6GALNAC6Q969X2 333 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 TNFRSF18Q9Y5U5 241 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 GGTLC3B5MD39 225 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 EVI2AP22794 236 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 VPS25Q9BRG1 176 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 DSCAMO60469 2012 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 IGLC7A0M8Q6 106 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 PSG3Q16557 428 aa10.42□□□□□ -0.74
PCDHGB1-201ENST00000523390 A6NDN8 102 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 NCR2O95944 276 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 YPEL3P61236 119 aaPredicted RBP10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 LYZL1Q6UWQ5 148 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 C5orf30Q96GV9 206 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 C2CD3Q4AC94 2353 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 A0A1B0GUS0 222 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 IGHV4-39P01824 125 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 PSMB2P49721 201 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 SSBP2P81877 361 aaPredicted RBP10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 LY96Q9Y6Y9 160 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 H7C1H1 209 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 IGLC1P0CG04 106 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 Q6ZPA2 131 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 SNAI2O43623 268 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 SH2D1AO60880 128 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 ERCC8Q13216 396 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 LBHQ53QV2 105 aaPredicted RBP10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 C19orf54Q5BKX5 351 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 Q86TA4 180 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 FOXC2Q99958 501 aa10.41□□□□□ -0.74
PCDHGB1-201ENST00000523390 GCSHP23434 173 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 COL5A1-AS1Q5SY13 56 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms