RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 J3KRW8 73 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 CD3DP04234 171 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 RAB11AP62491 216 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 SLAQ13239 276 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 SCGB2B2Q4G0G5 96 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 LRTM2Q8N967 370 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 OR1S1Q8NH92 325 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 MARCH1Q8TCQ1 289 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 PYGO2Q9BRQ0 406 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 NAA60Q9H7X0 242 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 GSN-AS1Q9NRJ2 163 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 PAIP2BQ9ULR5 123 aaKnown RBP8.78□□□□□ -1
SRGAP3-212ENST00000520860 C14orf166Q9Y224 244 aaKnown RBP8.78□□□□□ -1
SRGAP3-212ENST00000520860 RNF213Q63HN8 5207 aa8.78□□□□□ -1
SRGAP3-212ENST00000520860 TRAV12-3A0A0B4J271 114 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 H3BRN7 92 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 RS1O15537 224 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 IGHV3-53P01767 116 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 TBPP20226 339 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 GATA2P23769 480 aaPredicted RBP8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 RAP2BP61225 183 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 ZNF680Q8NEM1 530 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 NRG4Q8WWG1 115 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 IL22RA2Q969J5 263 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 SHANK2-AS3Q9BTD1 123 aa8.77□□□□□ -1.01
SRGAP3-212ENST00000520860 A0A087X0K7 114 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 PRAF2O60831 178 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 SRIP30626 198 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 CCR6P51684 374 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 CRYBA4P53673 196 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 SMCO1Q147U7 214 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 SCXQ7RTU7 201 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 ST6GAL2Q96JF0 529 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 C8orf49Q96NF6 230 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 HHLA3Q9XRX5 114 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 HIGD1AQ9Y241 93 aa8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 RCL1Q9Y2P8 373 aaKnown RBP8.76□□□□□ -1.01
SRGAP3-212ENST00000520860 APOA1P02647 267 aa8.75□□□□□ -1.01
SRGAP3-212ENST00000520860 LEPP41159 167 aa8.75□□□□□ -1.01
SRGAP3-212ENST00000520860 IZUMO2Q6UXV1 221 aa8.75□□□□□ -1.01
SRGAP3-212ENST00000520860 PCNPQ8WW12 178 aaKnown RBP8.75□□□□□ -1.01
SRGAP3-212ENST00000520860 RAB26Q9ULW5 256 aa8.75□□□□□ -1.01
SRGAP3-212ENST00000520860 AKR1C4P17516 323 aa8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 RPS19P39019 145 aaKnown RBP8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 AKR1C1Q04828 323 aa8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 ZNF415Q09FC8 603 aa8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 TMEM182Q6ZP80 229 aaPredicted RBP8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 C11orf72Q8NBR9 251 aa8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 RTBDNQ9BSG5 229 aaPredicted RBP8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 Q9HAA7 133 aa8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 COMMD3Q9UBI1 195 aa8.74□□□□□ -1.01
SRGAP3-212ENST00000520860 FAT3Q8TDW7 4589 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 CRYM-AS1A6NIL9 109 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 E5RGE8 158 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 SPINK4O60575 86 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 HYPMO75409 117 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 OR5G3P0C626 314 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 CXCL2P19875 107 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 TGFBR1P36897 503 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 LCN15Q6UWW0 184 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 S100A7AQ86SG5 101 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 OR4D10Q8NGI6 311 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 VGLL1Q99990 258 aa8.73□□□□□ -1.01
SRGAP3-212ENST00000520860 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 K7EQD1 137 aa8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 RAB3DO95716 219 aa8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 IL5P05113 134 aa8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 IAPPP10997 89 aa8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 ANXA7P20073 488 aaKnown RBP8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 ZBTB8BQ8NAP8 495 aaPredicted RBP8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 ZNF431Q8TF32 576 aaPredicted RBP8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 SLC50A1Q9BRV3 221 aa8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 ZNF331Q9NQX6 463 aaPredicted RBP8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 KLF12Q9Y4X4 402 aa8.72□□□□□ -1.01
SRGAP3-212ENST00000520860 A0A0B4J2A0 478 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 TRGV4A0A0C4DH28 118 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 IBA57-AS1B1ANH7 110 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 PRAC2D3DTV9 90 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 GYPEP15421 78 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 TCL1AP56279 114 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 TAS2R19P59542 299 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 FHL2Q14192 279 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 SURF2Q15527 256 aaPredicted RBP8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 ANXA2RQ3ZCQ2 193 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 EIF4E3Q8N5X7 224 aaKnown RBP8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 OR52I2Q8NH67 350 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 ODF3Q96PU9 254 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 MRPL16Q9NX20 251 aaKnown RBP8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 PRR13Q9NZ81 148 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 MTFP1Q9UDX5 166 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 SHPKQ9UHJ6 478 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 RNF24Q9Y225 148 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 KCNIP3Q9Y2W7 256 aa8.71□□□□□ -1.02
SRGAP3-212ENST00000520860 LINC00854A0A1B0GVQ3 168 aa8.7□□□□□ -1.02
SRGAP3-212ENST00000520860 PMS2P5A8MQ11 134 aa8.7□□□□□ -1.02
SRGAP3-212ENST00000520860 ORM1P02763 201 aa8.7□□□□□ -1.02
SRGAP3-212ENST00000520860 SLC25A5P05141 298 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms