RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 ZNF414Q96IQ9 312 aa6.32□□□□□ -1.4
SLIT3-205ENST00000519486 HIST1H4GQ99525 98 aa6.32□□□□□ -1.4
SLIT3-205ENST00000519486 MOSP00540 346 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 CT45A10P0DMU9 189 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 COX8AP10176 69 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 LY6EQ16553 131 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 PGPA6NDG6 321 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 SAA1P0DJI8 122 aaPredicted RBP6.31□□□□□ -1.4
SLIT3-205ENST00000519486 RPL27AP46776 148 aaKnown RBP6.31□□□□□ -1.4
SLIT3-205ENST00000519486 HERV-K104P63124 156 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 BCL6BQ8N143 479 aaPredicted RBP6.31□□□□□ -1.4
SLIT3-205ENST00000519486 MGST2Q99735 147 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 TP53TG3Q9ULZ0 132 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 SPEGQ15772 3267 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 F8W1H4 67 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 IGHV1-46P01743 117 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 APOHP02749 345 aaPredicted RBP6.31□□□□□ -1.4
SLIT3-205ENST00000519486 NPPCP23582 126 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 GAGE2BQ13066 116 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 MLANAQ16655 118 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 GAGE2EQ4V326 116 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 C10orf55Q5SWW7 151 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 GAGE2DQ9UEU5 116 aa6.31□□□□□ -1.4
SLIT3-205ENST00000519486 TRAV40A0A0B4J280 105 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 MBNL2Q5VZF2 373 aaKnown RBP6.3□□□□□ -1.4
SLIT3-205ENST00000519486 OR4F17Q8NGA8 305 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 CFAP54Q96N23 3096 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 C3orf36Q3SXR2 165 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 TCTEX1D4Q5JR98 221 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 DUX4L9Q6RFH8 374 aaPredicted RBP6.3□□□□□ -1.4
SLIT3-205ENST00000519486 TTC9CQ8N5M4 171 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 VGLL1Q99990 258 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 IFI27L2Q9H2X8 130 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 V9GYV3 84 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 TMEM262E9PQX1 116 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 IL4P05112 153 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 VDAC2P45880 294 aaPredicted RBP6.3□□□□□ -1.4
SLIT3-205ENST00000519486 ODF1Q14990 250 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 NEUROG1Q92886 237 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 RABAC1Q9UI14 185 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 UFC1Q9Y3C8 167 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 UPK2O00526 184 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 IGKV1-16P04430 117 aa6.3□□□□□ -1.4
SLIT3-205ENST00000519486 RPL11P62913 178 aaKnown RBP6.3□□□□□ -1.4
SLIT3-205ENST00000519486 E7EQL1 145 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 ZNF134P52741 427 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 TMEM155Q4W5P6 130 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 PSMG4Q5JS54 123 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 C11orf53Q8IXP5 236 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 SOX21Q9Y651 276 aaPredicted RBP6.29□□□□□ -1.4
SLIT3-205ENST00000519486 SYT8Q8NBV8 401 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.29□□□□□ -1.4
SLIT3-205ENST00000519486 OSR1Q8TAX0 266 aaPredicted RBP6.29□□□□□ -1.4
SLIT3-205ENST00000519486 TRAV5A0A0B4J249 113 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 LYNX1G3V0Z9 82 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 LYNX1P0DP58 116 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 PYYP10082 97 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 PRB4P10163 310 aaPredicted RBP6.29□□□□□ -1.4
SLIT3-205ENST00000519486 SRSF9Q13242 221 aaKnown RBP eCLIP6.29□□□□□ -1.4
SLIT3-205ENST00000519486 C11orf1Q9H5F2 150 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
SLIT3-205ENST00000519486 CPAMD8Q8IZJ3 1885 aa6.29□□□□□ -1.4
SLIT3-205ENST00000519486 POLQO75417 2590 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 IGLV2-14P01704 120 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 LINC00305Q7Z4B0 112 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 ODF3L1Q8IXM7 274 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 LINC00312Q9Y6C7 94 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 TMSB15BA0A087X1C1 80 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 TCRBV4S1A1TA0A5B7 111 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 INAFM1C9JVW0 142 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 CACNG7P62955 275 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 LOXL1Q08397 574 aaPredicted RBP6.28□□□□□ -1.4
SLIT3-205ENST00000519486 TCF24Q7RTU0 167 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 MBD6Q96DN6 1003 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 PRCDQ00LT1 54 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 SHISA2Q6UWI4 295 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 SCGB1D4Q6XE38 83 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 PRNTQ86SH4 94 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 WFDC11Q8NEX6 87 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 NUP35Q8NFH5 326 aa6.28□□□□□ -1.4
SLIT3-205ENST00000519486 C15orf65H3BRN8 121 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 FRMD6-AS1P0C7T7 363 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 VWC2Q2TAL6 325 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 NRGNQ92686 78 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 TMUB1Q9BVT8 246 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 S4R3C0 116 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 GAGE12JA6NER3 117 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 GAGE7O76087 117 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 GAGE12FP0CL80 117 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 GAGE12GP0CL81 117 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 GAGE12IP0CL82 117 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 GAGE4Q13068 117 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 TMEM30BQ3MIR4 351 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 SPRNQ5BIV9 151 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 SH2D6Q7Z4S9 175 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 ARPC1AQ92747 370 aa6.27□□□□□ -1.41
SLIT3-205ENST00000519486 AAMDCQ9H7C9 122 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms