RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 RBMXL3Q8N7X1 1067 aaKnown RBP10.76□□□□□ -0.69
PABPC1-208ENST00000519004 MRPL36Q9P0J6 103 aaKnown RBP10.76□□□□□ -0.69
PABPC1-208ENST00000519004 DPM2O94777 84 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
PABPC1-208ENST00000519004 PIP4P1Q86T03 277 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 THAP8Q8NA92 274 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 CENPVL3A0A0U1RRI6 287 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 TMEM8BA6NDV4 472 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 ORM2P19652 201 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 PSMB2P49721 201 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 MDP1Q86V88 176 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 ASCL2Q99929 193 aa10.75□□□□□ -0.69
PABPC1-208ENST00000519004 HOXA3O43365 443 aaPredicted RBP10.74□□□□□ -0.69
PABPC1-208ENST00000519004 PRSS1P07477 247 aa10.74□□□□□ -0.69
PABPC1-208ENST00000519004 COX6A1P12074 109 aa10.74□□□□□ -0.69
PABPC1-208ENST00000519004 GOLT1AQ6ZVE7 132 aa10.74□□□□□ -0.69
PABPC1-208ENST00000519004 FOXC2Q99958 501 aa10.74□□□□□ -0.69
PABPC1-208ENST00000519004 VPREB3Q9UKI3 123 aa10.74□□□□□ -0.69
PABPC1-208ENST00000519004 IQCF6A8MYZ5 107 aa10.74□□□□□ -0.69
PABPC1-208ENST00000519004 IL4P05112 153 aa10.74□□□□□ -0.69
PABPC1-208ENST00000519004 FAM173AQ9BQD7 235 aa10.74□□□□□ -0.69
PABPC1-208ENST00000519004 TRBV6-1A0A0K0K1D8 114 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 A0A1W2PQM1 296 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 LINC01546A6NGU7 62 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 TMEM262E9PQX1 116 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 LINC01619G3V211 115 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 CRIP1P50238 77 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 ZFP2Q6ZN57 461 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 SBSPONQ8IVN8 264 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 RPEQ96AT9 228 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 OBP2BQ9NPH6 170 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 IGKV1-16P04430 117 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 LEPP41159 167 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 GAGE2BQ13066 116 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 TWIST1Q15672 202 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 GAGE2EQ4V326 116 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 LYZL1Q6UWQ5 148 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 FBXL15Q9H469 300 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 IGFLR1Q9H665 355 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 OTORQ9NRC9 128 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 GAGE2DQ9UEU5 116 aa10.73□□□□□ -0.69
PABPC1-208ENST00000519004 TRAV40A0A0B4J280 105 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 PPP1R35Q8TAP8 253 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 NDUFA4L2Q9NRX3 87 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 TMEM160Q9NX00 188 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 TRAV4A0A0B4J268 109 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 SAA1P0DJI8 122 aaPredicted RBP10.72□□□□□ -0.69
PABPC1-208ENST00000519004 CKS2P33552 79 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 UBE2D3P61077 147 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 UBE2D2P62837 147 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 TBC1D28Q2M2D7 210 aa10.72□□□□□ -0.69
PABPC1-208ENST00000519004 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
PABPC1-208ENST00000519004 TRANK1O15050 2925 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 E7EUB6 86 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 IGHG4P01861 327 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 IFITM1P13164 125 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 PRDX2P32119 198 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 PEAR1Q5VY43 1037 aaPredicted RBP10.71□□□□□ -0.69
PABPC1-208ENST00000519004 FAM159AQ6UWV7 190 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 EXOC3-AS1Q8N2X6 119 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 PPDPFQ9H3Y8 114 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 MAP1LC3AQ9H492 121 aa10.71□□□□□ -0.69
PABPC1-208ENST00000519004 SPTBN5Q9NRC6 3674 aaKnown RBP10.71□□□□□ -0.7
PABPC1-208ENST00000519004 PINLYPA6NC86 204 aa10.7□□□□□ -0.7
PABPC1-208ENST00000519004 LINC01549A6NIU2 74 aa10.7□□□□□ -0.7
PABPC1-208ENST00000519004 CRLF1O75462 422 aa10.7□□□□□ -0.7
PABPC1-208ENST00000519004 ATP5LO75964 103 aa10.7□□□□□ -0.7
PABPC1-208ENST00000519004 ERHP84090 104 aaKnown RBP10.7□□□□□ -0.7
PABPC1-208ENST00000519004 RUSC1-AS1Q66K80 236 aa10.7□□□□□ -0.7
PABPC1-208ENST00000519004 SFTA2Q6UW10 78 aa10.7□□□□□ -0.7
PABPC1-208ENST00000519004 ANKRD29Q8N6D5 301 aa10.7□□□□□ -0.7
PABPC1-208ENST00000519004 ZNF71Q9NQZ8 489 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-208ENST00000519004 CALYQ9NYX4 217 aa10.7□□□□□ -0.7
PABPC1-208ENST00000519004 MRPL35Q9NZE8 188 aaKnown RBP10.7□□□□□ -0.7
PABPC1-208ENST00000519004 TMSB15BA0A087X1C1 80 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 CCL5P13501 91 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 CXXC4Q9H2H0 198 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 DOCK7Q96N67 2140 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 MYMXA0A1B0GTQ4 84 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 A8MWV9 139 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 WT1-ASQ06250 92 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 Q6ZS52 159 aa10.69□□□□□ -0.7
PABPC1-208ENST00000519004 IGHV1OR15-9A0A0B4J2B8 117 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 INS-IGF2F8WCM5 200 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 M0QXV9 152 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 FCN3O75636 299 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 NXPH1P58417 271 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 C17orf58Q2M2W7 97 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 Q6Q795 121 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 TMEM75Q8N9X5 138 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 IGKV1D-17A0A075B6S4 117 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 CGB1A6NKQ9 187 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 LINC01565O15544 149 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 SNCGO76070 127 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 TCL1BO95988 128 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 CGB3P0DN86 165 aa10.68□□□□□ -0.7
PABPC1-208ENST00000519004 CGB7P0DN87 165 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms