RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SCGB2A2Q13296 93 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 RNF152Q8N8N0 203 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 MYOZ3Q8TDC0 251 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 UBE2E2Q96LR5 201 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 U3KQE9 123 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 IGHV4OR15-8A0A075B7B6 117 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 A0A087WW49 117 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 ZNF785A8K8V0 405 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 M0R3E3 92 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 PEX7O00628 323 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 ISLRO14498 428 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 HLA-DMBP28068 263 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 RHEBQ15382 184 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 RPEL1Q2QD12 228 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 KHDC1LQ5JSQ8 128 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 FAM209BQ5JX69 171 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 SIGLEC15Q6ZMC9 328 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 LINC01551Q86U37 167 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 NHLRC2Q8NBF2 726 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 LINC01006Q8NI28 216 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 DUX3Q96PT4 197 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 ASCL2Q99929 193 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 OTORQ9NRC9 128 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 K7EN84 100 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 LGALS1P09382 135 aaKnown RBP6.99□□□□□ -1.29
CPNE4-213ENST00000515418 ATF4P18848 351 aaPredicted RBP6.99□□□□□ -1.29
CPNE4-213ENST00000515418 OR5I1Q13606 314 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 RNF212Q495C1 297 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 FAM106AQ4KMX7 169 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 CENPWQ5EE01 88 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 TMEM190Q8WZ59 177 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 RNF24Q9Y225 148 aa6.99□□□□□ -1.29
CPNE4-213ENST00000515418 TENM1Q9UKZ4 2725 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 IGKV3-7A0A075B6H7 116 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 TRAV8-1A0A0A6YYK1 113 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 ZNF705FA8MVS1 300 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-213ENST00000515418 TCRAP04437 139 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 FOSL1P15407 271 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 GNG4P50150 75 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 SYNJ2BPP57105 145 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 PNRC1Q12796 327 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-213ENST00000515418 GOLT1AQ6ZVE7 132 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 GPHB5Q86YW7 130 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 RNF182Q8N6D2 247 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 C5orf17Q8NAS9 161 aa6.98□□□□□ -1.29
CPNE4-213ENST00000515418 TMA7Q9Y2S6 64 aaKnown RBP6.98□□□□□ -1.29
CPNE4-213ENST00000515418 A0A1W2PRX2 142 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 TSPAN4O14817 238 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 IGLV2-8P01709 118 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 CD28P10747 220 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 CDX1P47902 265 aaPredicted RBP6.97□□□□□ -1.29
CPNE4-213ENST00000515418 CNN1P51911 297 aaKnown RBP6.97□□□□□ -1.29
CPNE4-213ENST00000515418 C1orf194Q5T5A4 169 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 C16orf54Q6UWD8 224 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 CMTM2Q8TAZ6 248 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 HIST1H2BAQ96A08 127 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 RHPN1-AS1Q9BWJ2 59 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 SMCO4Q9NRQ5 59 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 URGCP-MRPS24S4R325 110 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 ATRQ13535 2644 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 B4DEV8 164 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 S100A7P31151 101 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 HOXD3P31249 432 aaPredicted RBP6.97□□□□□ -1.29
CPNE4-213ENST00000515418 GALR1P47211 349 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 SLURP1P55000 103 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 RPL11P62913 178 aaKnown RBP6.97□□□□□ -1.29
CPNE4-213ENST00000515418 FAM24BQ8N5W8 94 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 OR11H1Q8NG94 326 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 WIPF2Q8TF74 440 aaPredicted RBP6.97□□□□□ -1.29
CPNE4-213ENST00000515418 GLMPQ8WWB7 406 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 IGF2BP2-AS1Q96M15 143 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 ATG101Q9BSB4 218 aa6.97□□□□□ -1.29
CPNE4-213ENST00000515418 DAZ1Q9NQZ3 744 aaKnown RBP6.97□□□□□ -1.29
CPNE4-213ENST00000515418 A0A087WWC5 75 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 IGHV7-4-1A0A0J9YVY3 117 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 COLCA2A8K830 154 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 C9JCJ5 164 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 DIRC3C9JPN6 131 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 CHEK1O14757 476 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 MGST1P10620 155 aaKnown RBP6.96□□□□□ -1.3
CPNE4-213ENST00000515418 PDE6HQ13956 83 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 BAGE2Q86Y30 109 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 LYPD1Q8N2G4 141 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 KLHL30-AS1Q8NEE0 82 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 C16orf95Q9H693 158 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 AAMDCQ9H7C9 122 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 ZNF331Q9NQX6 463 aaPredicted RBP6.96□□□□□ -1.3
CPNE4-213ENST00000515418 SMPXQ9UHP9 88 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 KLF12Q9Y4X4 402 aa6.96□□□□□ -1.3
CPNE4-213ENST00000515418 MAST4O15021 2626 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 PRAC2D3DTV9 90 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 CRLF1O75462 422 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 IGLV2-11P01706 119 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 MT-ND4LP03901 98 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 UBE2G1P62253 170 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 PSG9Q00887 426 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 TMEM183BQ1AE95 376 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 C8orf86Q6ZUL3 223 aa6.95□□□□□ -1.3
CPNE4-213ENST00000515418 GPR82Q96P67 336 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms