RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 LINC01619G3V211 115 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 EREGO14944 169 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 C10orf91Q5T1B1 145 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 VOPP1Q96AW1 172 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 HEATR1Q9H583 2144 aaKnown RBP13.03□□□□□ -0.32
TRIM41-207ENST00000515223 SMPXQ9UHP9 88 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 TRAV1-1A0A0B4J248 108 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 TMEM249Q2WGJ8 235 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 IGFL3Q6UXB1 125 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 LYPD1Q8N2G4 141 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 C5orf30Q96GV9 206 aa13.03□□□□□ -0.32
TRIM41-207ENST00000515223 WNK2Q9Y3S1 2297 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 TCRAP04437 139 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 DAD1P61803 113 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 THSD7BQ9C0I4 1608 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 IGHV3-64A0A075B6Q5 118 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 TMEM238C9JI98 176 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 IGHV4-39P01824 125 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 FAM90A2PQ658T7 463 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 LHFPL4Q7Z7J7 247 aa13.02□□□□□ -0.32
TRIM41-207ENST00000515223 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.32
TRIM41-207ENST00000515223 TOMM40O96008 361 aa13.02□□□□□ -0.33
TRIM41-207ENST00000515223 GZMBP10144 247 aa13.02□□□□□ -0.33
TRIM41-207ENST00000515223 SPATA31B1PQ5VZV4 182 aa13.02□□□□□ -0.33
TRIM41-207ENST00000515223 PLEKHB2Q96CS7 222 aa13.02□□□□□ -0.33
TRIM41-207ENST00000515223 RUSC1-AS1Q66K80 236 aa13.02□□□□□ -0.33
TRIM41-207ENST00000515223 LURAP1LQ8IV03 231 aa13.02□□□□□ -0.33
TRIM41-207ENST00000515223 GNB1LQ9BYB4 327 aa13.02□□□□□ -0.33
TRIM41-207ENST00000515223 PRB4P10163 310 aaPredicted RBP13.02□□□□□ -0.33
TRIM41-207ENST00000515223 NHP2Q9NX24 153 aaKnown RBP13.02□□□□□ -0.33
TRIM41-207ENST00000515223 TRBV6-6A0A0A6YYG2 114 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 GATA4P43694 442 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 PHF3Q92576 2039 aaKnown RBP13.01□□□□□ -0.33
TRIM41-207ENST00000515223 PLXNA4Q9HCM2 1894 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 IGHV2-70P01814 119 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 PLXNA2O75051 1894 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 F5H768 121 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 M0R2P5 195 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 ZNF562Q6V9R5 426 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 FAM110DQ8TAY7 271 aaPredicted RBP13.01□□□□□ -0.33
TRIM41-207ENST00000515223 HOXA3O43365 443 aaPredicted RBP13.01□□□□□ -0.33
TRIM41-207ENST00000515223 LINC01551Q86U37 167 aa13.01□□□□□ -0.33
TRIM41-207ENST00000515223 WIPF3A6NGB9 483 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 HAPLN4Q86UW8 402 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 GATD1Q8NB37 220 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 CLDN16Q9Y5I7 305 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 TRAV3A0A0B4J244 114 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 APOC4P55056 127 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 PSG3Q16557 428 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 Q6P435 159 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 MS4A6AQ9H2W1 248 aa13□□□□□ -0.33
TRIM41-207ENST00000515223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.99□□□□□ -0.331e-7■■■■□ 24.4
TRIM41-207ENST00000515223 A0A1B0GUS0 222 aa12.99□□□□□ -0.33
TRIM41-207ENST00000515223 C1orf194Q5T5A4 169 aa12.99□□□□□ -0.33
TRIM41-207ENST00000515223 TRAV8-2A0A0B4J237 113 aa12.99□□□□□ -0.33
TRIM41-207ENST00000515223 Q6ZRM9 215 aa12.99□□□□□ -0.33
TRIM41-207ENST00000515223 LSM4Q9Y4Z0 139 aaKnown RBP12.99□□□□□ -0.33
TRIM41-207ENST00000515223 LINC00205P59089 165 aa12.99□□□□□ -0.33
TRIM41-207ENST00000515223 LYZL1Q6UWQ5 148 aa12.99□□□□□ -0.33
TRIM41-207ENST00000515223 ATXN8Q156A1 80 aa12.99□□□□□ -0.33
TRIM41-207ENST00000515223 Q71RC1 249 aaPredicted RBP12.99□□□□□ -0.33
TRIM41-207ENST00000515223 LIME1Q9H400 295 aa12.99□□□□□ -0.33
TRIM41-207ENST00000515223 HEATR5AQ86XA9 2040 aa12.98□□□□□ -0.33
TRIM41-207ENST00000515223 INS-IGF2F8WCM5 200 aa12.98□□□□□ -0.33
TRIM41-207ENST00000515223 Q8TAT8 98 aa12.98□□□□□ -0.33
TRIM41-207ENST00000515223 C1orf147Q96MC9 270 aaPredicted RBP12.98□□□□□ -0.33
TRIM41-207ENST00000515223 HS3ST6Q96QI5 342 aa12.98□□□□□ -0.33
TRIM41-207ENST00000515223 NBL1P41271 181 aa12.98□□□□□ -0.33
TRIM41-207ENST00000515223 FOXL1Q12952 345 aa12.98□□□□□ -0.33
TRIM41-207ENST00000515223 SFTA2Q6UW10 78 aa12.98□□□□□ -0.33
TRIM41-207ENST00000515223 NIT1Q86X76 327 aa12.98□□□□□ -0.33
TRIM41-207ENST00000515223 MGST2Q99735 147 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 IGHV2-70DA0A0C4DH43 119 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 RHODO00212 210 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 SH2D1AO60880 128 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 NCR2O95944 276 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 IGHV2-5P01817 119 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 XCL2Q9UBD3 114 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 ERG28Q9UKR5 140 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.97□□□□□ -0.33
TRIM41-207ENST00000515223 RASL11AQ6T310 242 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 C14orf178Q8N769 122 aaPredicted RBP12.97□□□□□ -0.33
TRIM41-207ENST00000515223 LAMTOR3Q9UHA4 124 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 PI4KAP42356 2102 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 AGMATQ9BSE5 352 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 ZMAT4Q9H898 229 aa12.97□□□□□ -0.33
TRIM41-207ENST00000515223 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.33
TRIM41-207ENST00000515223 LINC00473A8K010 186 aa12.96□□□□□ -0.33
TRIM41-207ENST00000515223 ATP6V0E1O15342 81 aa12.96□□□□□ -0.33
TRIM41-207ENST00000515223 DLEU1O43261 78 aa12.96□□□□□ -0.33
TRIM41-207ENST00000515223 D6R8Y8 96 aa12.96□□□□□ -0.33
TRIM41-207ENST00000515223 TMEM14EPQ6UXP3 125 aa12.96□□□□□ -0.33
TRIM41-207ENST00000515223 ITGB1BP1O14713 200 aa12.96□□□□□ -0.33
TRIM41-207ENST00000515223 CDPF1Q6NVV7 123 aa12.96□□□□□ -0.33
TRIM41-207ENST00000515223 TRAV9-2A0A087WT02 112 aa12.96□□□□□ -0.34
TRIM41-207ENST00000515223 ZNF561-AS1K7EIQ3 104 aa12.95□□□□□ -0.34
TRIM41-207ENST00000515223 CSTL1Q9H114 145 aa12.95□□□□□ -0.34
TRIM41-207ENST00000515223 H3BUT2 72 aa12.95□□□□□ -0.34
TRIM41-207ENST00000515223 ANAPC10Q9UM13 185 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms