RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 LAGE3Q14657 143 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 C15orf53Q8NAA6 179 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 DEFB136Q30KP8 78 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 IGKV1D-8A0A087WSZ0 117 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 TRAV25A0A0B4J276 109 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 H2BFSP57053 126 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 ID3Q02535 119 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 NDUFA4L2Q9NRX3 87 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 SNRPEP62304 92 aaKnown RBP5.96□□□□□ -1.46
CCDC30-214ENST00000514642 SSBP2P81877 361 aaPredicted RBP5.96□□□□□ -1.46
CCDC30-214ENST00000514642 IGFL4Q6B9Z1 124 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 WDR86Q86TI4 376 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 PLXND1Q9Y4D7 1925 aa5.96□□□□□ -1.46
CCDC30-214ENST00000514642 WFDC11Q8NEX6 87 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 LSM4Q9Y4Z0 139 aaKnown RBP5.95□□□□□ -1.46
CCDC30-214ENST00000514642 TMEM131Q92545 1883 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 CNTRLQ7Z7A1 2325 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 ADAMTS9Q9P2N4 1935 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 SLC17A3O00476 420 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 TCRAP04437 139 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 SPATA45Q537H7 98 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 CSTL1Q9H114 145 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 IGKV2D-24A0A075B6R9 120 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.95□□□□□ -1.46
CCDC30-214ENST00000514642 RNF183Q96D59 192 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 TMEM243Q9BU79 118 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 OSTCQ9NRP0 149 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 MRPL16Q9NX20 251 aaKnown RBP5.95□□□□□ -1.46
CCDC30-214ENST00000514642 KIAA1644Q3SXP7 199 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 NPBQ8NG41 125 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 WIPF2Q8TF74 440 aaPredicted RBP5.95□□□□□ -1.46
CCDC30-214ENST00000514642 C1orf159Q96HA4 380 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 SDHCQ99643 169 aaPredicted RBP5.95□□□□□ -1.46
CCDC30-214ENST00000514642 TM2D2Q9BX73 214 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 CTSZQ9UBR2 303 aa5.95□□□□□ -1.46
CCDC30-214ENST00000514642 TNFRSF6BO95407 300 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 RHOHQ15669 191 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 TMEM95Q3KNT9 176 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 ATP5G1P05496 136 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 FOXA3P55318 350 aaPredicted RBP5.94□□□□□ -1.46
CCDC30-214ENST00000514642 TMEM75Q8N9X5 138 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 RNF152Q8N8N0 203 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 SMPXQ9UHP9 88 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 C15orf62A8K5M9 175 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 ZNF134P52741 427 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 GFI1BQ5VTD9 330 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 RNF144BQ7Z419 303 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 ATP5L2Q7Z4Y8 100 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 Q8TAT8 98 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 CITED2Q99967 270 aaPredicted RBP5.94□□□□□ -1.46
CCDC30-214ENST00000514642 A0A087WWL8 130 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 UBE2CO00762 179 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 IGKV1-5P01602 117 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 HIST2H2BCQ6DN03 193 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 RPP25LQ8N5L8 163 aaKnown RBP5.94□□□□□ -1.46
CCDC30-214ENST00000514642 TSKUQ8WUA8 353 aa5.94□□□□□ -1.46
CCDC30-214ENST00000514642 CABIN1Q9Y6J0 2220 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 IGKV1OR2-108A0A075B7D4 117 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 IGHV3-16A0A0C4DH30 117 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 HILS1P60008 231 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 LINC01559Q495D7 138 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 SPATA25Q9BR10 227 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 MS4A6AQ9H2W1 248 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 EDA2RQ9HAV5 297 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 LDLRAD4O15165 306 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 PRR31Q5SQ13 230 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 RNASE7Q9H1E1 156 aaKnown RBP5.93□□□□□ -1.46
CCDC30-214ENST00000514642 A0A0J9YY99 117 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 M0R2P5 195 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 SPRY2O43597 315 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 MDKP21741 143 aaPredicted RBP5.93□□□□□ -1.46
CCDC30-214ENST00000514642 MRPL23Q16540 153 aaKnown RBP5.93□□□□□ -1.46
CCDC30-214ENST00000514642 PLEKHB2Q96CS7 222 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 NOP10Q9NPE3 64 aaKnown RBP5.93□□□□□ -1.46
CCDC30-214ENST00000514642 CD300EQ496F6 205 aaPredicted RBP5.93□□□□□ -1.46
CCDC30-214ENST00000514642 C15orf65H3BRN8 121 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 HBDP02042 147 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 RPL24P83731 157 aaKnown RBP5.93□□□□□ -1.46
CCDC30-214ENST00000514642 LBHQ53QV2 105 aaPredicted RBP5.93□□□□□ -1.46
CCDC30-214ENST00000514642 LYZL1Q6UWQ5 148 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 C5orf56Q8N8D9 126 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 GFI1Q99684 422 aa5.93□□□□□ -1.46
CCDC30-214ENST00000514642 H3BRN7 92 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 FABP2P12104 132 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 SLC25A34Q6PIV7 304 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 C14orf178Q8N769 122 aaPredicted RBP5.92□□□□□ -1.46
CCDC30-214ENST00000514642 ZNF25P17030 456 aaPredicted RBP5.92□□□□□ -1.46
CCDC30-214ENST00000514642 SRSF2Q01130 221 aaKnown RBP5.92□□□□□ -1.46
CCDC30-214ENST00000514642 MAJINQ3KP22 176 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 Q6YL49 198 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 PAM16Q9Y3D7 125 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 TRAV13-1A0A0B4J241 112 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 IGHV1-24A0A0C4DH33 117 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 GAGE10A6NGK3 116 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 SEM1Q6ZVN7 128 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 CBLN2Q8IUK8 224 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 NUP214P35658 2090 aaPredicted RBP5.92□□□□□ -1.46
CCDC30-214ENST00000514642 TRAV12-2A0A075B6T6 113 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 IGHV4OR15-8A0A075B7B6 117 aa5.92□□□□□ -1.46
CCDC30-214ENST00000514642 A0A087WW49 117 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms