RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 RNF223E7ERA6 249 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 FOXG1P55316 489 aaPredicted RBP13.22□□□□□ -0.29
TRIO-221ENST00000513206 ZNF815PA8K554 130 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
TRIO-221ENST00000513206 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
TRIO-221ENST00000513206 SAA4P35542 130 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 PRR32B1ATL7 298 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 CD28P10747 220 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 USMG5Q96IX5 58 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 CYTL1Q9NRR1 136 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 LTBP2Q14767 1821 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 EDA2RQ9HAV5 297 aa13.22□□□□□ -0.29
TRIO-221ENST00000513206 GHRHP01286 108 aa13.21□□□□□ -0.29
TRIO-221ENST00000513206 MBD3L4A6NDZ8 208 aaPredicted RBP13.21□□□□□ -0.29
TRIO-221ENST00000513206 MBD3L3A6NE82 208 aaPredicted RBP13.21□□□□□ -0.29
TRIO-221ENST00000513206 MBD3L5A6NJ08 208 aaPredicted RBP13.21□□□□□ -0.29
TRIO-221ENST00000513206 MBD3L2Q8NHZ7 208 aaPredicted RBP13.21□□□□□ -0.29
TRIO-221ENST00000513206 MGST2Q99735 147 aa13.21□□□□□ -0.29
TRIO-221ENST00000513206 NXT2Q9NPJ8 142 aaKnown RBP13.21□□□□□ -0.29
TRIO-221ENST00000513206 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
TRIO-221ENST00000513206 K7EP13 123 aa13.21□□□□□ -0.29
TRIO-221ENST00000513206 C10orf91Q5T1B1 145 aa13.21□□□□□ -0.29
TRIO-221ENST00000513206 Q6ZS92 163 aa13.21□□□□□ -0.29
TRIO-221ENST00000513206 ZNF329Q86UD4 541 aa13.21□□□□□ -0.29
TRIO-221ENST00000513206 TMEM155Q4W5P6 130 aa13.21□□□□□ -0.3
TRIO-221ENST00000513206 Q96MF0 132 aa13.21□□□□□ -0.3
TRIO-221ENST00000513206 A0A087WV48 116 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 OSTCQ9NRP0 149 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 ADAMTS20P59510 1910 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 TRGV1A0A0A0MS02 117 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 MAPK1IP1LQ8NDC0 245 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 EXOC3-AS1Q8N2X6 119 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 NABP1Q96AH0 204 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 TTC28Q96AY4 2481 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 DPM2O94777 84 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 PHLDA1Q8WV24 401 aaPredicted RBP13.2□□□□□ -0.3
TRIO-221ENST00000513206 IGHV4-39P01824 125 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 SLC25A16P16260 332 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 C5orf64Q2M2E5 130 aa13.2□□□□□ -0.3
TRIO-221ENST00000513206 C17orf82Q86X59 251 aaPredicted RBP13.2□□□□□ -0.3
TRIO-221ENST00000513206 FCN3O75636 299 aa13.19□□□□□ -0.3
TRIO-221ENST00000513206 LCN12Q6JVE5 192 aa13.19□□□□□ -0.3
TRIO-221ENST00000513206 AGMATQ9BSE5 352 aa13.19□□□□□ -0.3
TRIO-221ENST00000513206 SRRM4A7MD48 611 aaKnown RBP13.19□□□□□ -0.3
TRIO-221ENST00000513206 CRYGSP22914 178 aa13.19□□□□□ -0.3
TRIO-221ENST00000513206 J3QRE1 110 aa13.19□□□□□ -0.3
TRIO-221ENST00000513206 PTPRBP23467 1997 aa13.19□□□□□ -0.3
TRIO-221ENST00000513206 hDV102S1A0JD36 115 aa13.19□□□□□ -0.3
TRIO-221ENST00000513206 Q71RC1 249 aaPredicted RBP13.19□□□□□ -0.3
TRIO-221ENST00000513206 OOSP1A8MZH6 123 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 E7EQL1 145 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 C3orf79P0CE67 100 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 TMEM86BQ8N661 226 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 SCRT1Q9BWW7 348 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 TSSC4Q9Y5U2 329 aaPredicted RBP13.18□□□□□ -0.3
TRIO-221ENST00000513206 BCL6BQ8N143 479 aaPredicted RBP13.18□□□□□ -0.3
TRIO-221ENST00000513206 COL8A2P25067 703 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 PSG3Q16557 428 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 CD177Q8N6Q3 437 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 IGHV3-64A0A075B6Q5 118 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 FAM223BA6NKX1 122 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 PRR30Q53SZ7 412 aaPredicted RBP13.18□□□□□ -0.3
TRIO-221ENST00000513206 FAM223AQ8IWN6 122 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 C1QTNF4Q9BXJ3 329 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 GAGE12HA6NDE8 117 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 PSPNO60542 156 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 GATA3P23771 443 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 GAS1P54826 345 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 CD300EQ496F6 205 aaPredicted RBP13.18□□□□□ -0.3
TRIO-221ENST00000513206 OCC1Q8TAD7 63 aa13.18□□□□□ -0.3
TRIO-221ENST00000513206 ABCA2Q9BZC7 2435 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 S100A7L2Q5SY68 101 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 SLC25A2Q9BXI2 301 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 ORMDL2Q53FV1 153 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 RASL11AQ6T310 242 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 HBDP02042 147 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 UBE2E2Q96LR5 201 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 A0A1W2PRE2 83 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 GUSBP1Q15486 140 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 H0YJW9 148 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 WFDC1Q9HC57 220 aa13.17□□□□□ -0.3
TRIO-221ENST00000513206 PLNP26678 52 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 IGKV1-27A0A075B6S5 117 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 EFNA2O43921 213 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 MSMBP08118 114 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 PRTN3P24158 256 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 C9orf153Q5TBE3 101 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 C10orf55Q5SWW7 151 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 LYPD2Q6UXB3 125 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 FAM231BA6NCW3 169 aa13.16□□□□□ -0.3
TRIO-221ENST00000513206 ATP5L2Q7Z4Y8 100 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 RNF166Q96A37 237 aaPredicted RBP13.15□□□□□ -0.3
TRIO-221ENST00000513206 LYPD3O95274 346 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 PPBPP02775 128 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 ZNF474Q6S9Z5 364 aaPredicted RBP13.15□□□□□ -0.3
TRIO-221ENST00000513206 TRGV9Q99603 122 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 SIGLEC9Q9Y336 463 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms