RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MEOX2P50222 304 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 UBE2L3P68036 154 aaKnown RBP9.42□□□□□ -0.9
PDPN-210ENST00000513143 GUK1Q16774 197 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
PDPN-210ENST00000513143 MS4A6AQ9H2W1 248 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 NRN1Q9NPD7 142 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 SORL1Q92673 2214 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 PKD1L1Q8TDX9 2849 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 IGKV3-7A0A075B6H7 116 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 RGS13O14921 159 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 ZNF253O75346 499 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 NMBP08949 121 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 SNRPCP09234 159 aaKnown RBP9.41□□□□□ -0.9
PDPN-210ENST00000513143 PSMB3P49720 205 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 CCL20P78556 96 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 LCN12Q6JVE5 192 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 DCANP1Q8TF63 244 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 GPR61Q9BZJ8 451 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
PDPN-210ENST00000513143 TRAV2A0A0B4J234 112 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 A0A1B0GV50 99 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 SOCS3O14543 225 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 NDUFB4O95168 129 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 RAB14P61106 215 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 PAFAH1B2P68402 229 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 PDE6HQ13956 83 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 IQCF2Q8IXL9 164 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 GBGT1Q8N5D6 347 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 BLNKQ8WV28 456 aa9.4□□□□□ -0.9
PDPN-210ENST00000513143 PCNPQ8WW12 178 aaKnown RBP9.4□□□□□ -0.9
PDPN-210ENST00000513143 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.9
PDPN-210ENST00000513143 H3BTX0 84 aa9.39□□□□□ -0.91
PDPN-210ENST00000513143 K7EQG2 157 aa9.39□□□□□ -0.91
PDPN-210ENST00000513143 DNASE2O00115 360 aaPredicted RBP9.39□□□□□ -0.91
PDPN-210ENST00000513143 SLC17A3O00476 420 aa9.39□□□□□ -0.91
PDPN-210ENST00000513143 PMS2P11Q13670 270 aa9.39□□□□□ -0.91
PDPN-210ENST00000513143 CLLU1Q5K131 121 aa9.39□□□□□ -0.91
PDPN-210ENST00000513143 SAMD13Q5VXD3 122 aa9.39□□□□□ -0.91
PDPN-210ENST00000513143 ZNF331Q9NQX6 463 aaPredicted RBP9.39□□□□□ -0.91
PDPN-210ENST00000513143 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
PDPN-210ENST00000513143 OR4C46A6NHA9 309 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 ISLRO14498 428 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 TFPI2P48307 235 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 PPT1P50897 306 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 PSG9Q00887 426 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 WFDC3Q8IUB2 231 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 LYPD1Q8N2G4 141 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 C16orf92Q96LL3 132 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 SLC50A1Q9BRV3 221 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 ARL2-SNX15V9GYD0 113 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 CMYA5Q8N3K9 4069 aa9.38□□□□□ -0.91
PDPN-210ENST00000513143 TRAV8-2A0A0B4J237 113 aa9.37□□□□□ -0.91
PDPN-210ENST00000513143 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
PDPN-210ENST00000513143 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
PDPN-210ENST00000513143 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
PDPN-210ENST00000513143 GUCA2BQ16661 112 aa9.37□□□□□ -0.91
PDPN-210ENST00000513143 BEAN1Q3B7T3 259 aa9.37□□□□□ -0.91
PDPN-210ENST00000513143 CLEC5AQ9NY25 188 aa9.37□□□□□ -0.91
PDPN-210ENST00000513143 FAM74A7A6NL05 159 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 PAGE4O60829 102 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 ID1P41134 155 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 FAM24BQ8N5W8 94 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 Q9H3A6 140 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 MANBALQ9NQG1 85 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 GNG13Q9P2W3 67 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 YTHDF2Q9Y5A9 579 aaKnown RBP9.36□□□□□ -0.91
PDPN-210ENST00000513143 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
PDPN-210ENST00000513143 IFNA1P01562 189 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 HLA-DMBP28068 263 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 UBE2G2P60604 165 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
PDPN-210ENST00000513143 EGFEM1PQ0D2K5 195 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 PSG3Q16557 428 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 IGFL4Q6B9Z1 124 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 EXOC3-AS1Q8N2X6 119 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 NKX6-2Q9C056 277 aaPredicted RBP9.35□□□□□ -0.91
PDPN-210ENST00000513143 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 PRELID1Q9Y255 219 aa9.35□□□□□ -0.91
PDPN-210ENST00000513143 PGPA6NDG6 321 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 G3V4G9 280 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 ZNF688P0C7X2 276 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 BCL2P10415 239 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 TAGLN2P37802 199 aaKnown RBP9.34□□□□□ -0.91
PDPN-210ENST00000513143 CMC4P56277 68 aaPredicted RBP9.34□□□□□ -0.91
PDPN-210ENST00000513143 SUMO1P63165 101 aaKnown RBP9.34□□□□□ -0.91
PDPN-210ENST00000513143 ICAM4Q14773 271 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 CST9LP1Q5W188 147 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 CCDC28AQ8IWP9 274 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 RNF182Q8N6D2 247 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 MRPL53Q96EL3 112 aaKnown RBP9.34□□□□□ -0.91
PDPN-210ENST00000513143 C20orf173Q96LM9 149 aa9.34□□□□□ -0.91
PDPN-210ENST00000513143 ZMAT5Q9UDW3 170 aaKnown RBP9.34□□□□□ -0.91
PDPN-210ENST00000513143 RBFOX3A6NFN3 312 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms